2gqc: Difference between revisions

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-{{Seed}}
-[[Image:2gqc.png|left|200px]]
-<!--
+==Solution structure of the N-terminal domain of Rhomboid Intramembrane Protease from P. aeruginosa==
-The line below this paragraph, containing "STRUCTURE_2gqc", creates the "Structure Box" on the page.
+<StructureSection load='2gqc' size='340' side='right'caption='[[2gqc]]' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2gqc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GQC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GQC FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
--->
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gqc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gqc OCA], [https://pdbe.org/2gqc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gqc RCSB], [https://www.ebi.ac.uk/pdbsum/2gqc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gqc ProSAT]</span></td></tr>
-{{STRUCTURE_2gqc|  PDB=2gqc  |  SCENE=  }}
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q9HZC2_PSEAE Q9HZC2_PSEAE]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gq/2gqc_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gqc ConSurf].
+<div style="clear:both"></div>
-===Solution structure of the N-terminal domain of Rhomboid Intramembrane Protease from P. aeruginosa===
+==See Also==
+*[[Rhomboid protease|Rhomboid protease]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_17059825}}, adds the Publication Abstract to the page
+[[Category: Large Structures]]
-(as it appears on PubMed at http://www.pubmed.gov), where 17059825 is the PubMed ID number.
+[[Category: Pseudomonas aeruginosa PAO1]]
--->
+[[Category: Chavez J]]
-{{ABSTRACT_PUBMED_17059825}}
+[[Category: Del Rio A]]
+[[Category: Dutta K]]
-==About this Structure==
+[[Category: Ghose R]]
-GQC is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_pao1 Pseudomonas aeruginosa pao1]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GQC OCA].
+[[Category: Ubarretxena-Belandia I]]
-==Reference==
-Solution structure and dynamics of the N-terminal cytosolic domain of rhomboid intramembrane protease from Pseudomonas aeruginosa: insights into a functional role in intramembrane proteolysis., Del Rio A, Dutta K, Chavez J, Ubarretxena-Belandia I, Ghose R, J Mol Biol. 2007 Jan 5;365(1):109-22. Epub 2006 Sep 23. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17059825 17059825]
-[[Category: Pseudomonas aeruginosa pao1]]
-[[Category: Rhomboid protease]]
-[[Category: Single protein]]
-[[Category: Chavez, J.]]
-[[Category: Dutta, K.]]
-[[Category: Ghose, R.]]
-[[Category: Rio, A Del.]]
-[[Category: Ubarretxena-Belandia, I.]]
-[[Category: Alpha-beta domain]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 04:05:03 2008''