1q53: Difference between revisions

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-[[Image:1q53.jpg|left|200px]]
-<!--
+==SOLUTION STRUCTURE OF HYPOTHETICAL ARABIDOPSIS THALIANA PROTEIN AT3G17210. CENTER FOR EUKARYOTIC STRUCTURAL GENOMICS TARGET 13081==
-The line below this paragraph, containing "STRUCTURE_1q53", creates the "Structure Box" on the page.
+<StructureSection load='1q53' size='340' side='right'caption='[[1q53]]' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1q53]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1nwj 1nwj]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Q53 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Q53 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
--->
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1q53 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1q53 OCA], [https://pdbe.org/1q53 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1q53 RCSB], [https://www.ebi.ac.uk/pdbsum/1q53 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1q53 ProSAT]</span></td></tr>
-{{STRUCTURE_1q53|  PDB=1q53  |  SCENE=  }}
+</table>
+== Function ==
-'''SOLUTION STRUCTURE OF HYPOTHETICAL ARABIDOPSIS THALIANA PROTEIN AT3G17210. CENTER FOR EUKARYOTIC STRUCTURAL GENOMICS TARGET 13081'''
+[https://www.uniprot.org/uniprot/POP3_ARATH POP3_ARATH]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
-==About this Structure==
+Check<jmol>
-Q53 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1nwj 1nwj]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Q53 OCA].
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/q5/1q53_consurf.spt"</scriptWhenChecked>
-==Reference==
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-Structure of the hypothetical protein At3g17210 from Arabidopsis thaliana., Lytle BL, Peterson FC, Kjer KL, Frederick RO, Zhao Q, Thao S, Bingman C, Johnson KA, Phillips GN Jr, Volkman BF, J Biomol NMR. 2004 Apr;28(4):397-400. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/14872131 14872131]
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1q53 ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
 [[Category: Arabidopsis thaliana]]
-[[Category: Single protein]]
+[[Category: Large Structures]]
-[[Category: CESG, Center for Eukaryotic Structural Genomics.]]
+[[Category: Lytle BL]]
-[[Category: Lytle, B L.]]
+[[Category: Peterson FC]]
-[[Category: Peterson, F C.]]
+[[Category: Volkman BF]]
-[[Category: Volkman, B F.]]
-[[Category: Center for eukaryotic structural genomic]]
-[[Category: Cesg]]
-[[Category: Protein structure initiative]]
-[[Category: Psi]]
-[[Category: Structural genomic]]
-[[Category: Unknown function]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 05:52:26 2008''