1o0r: Difference between revisions

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-[[Image:1o0r.png|left|200px]]
-{{STRUCTURE_1o0r|  PDB=1o0r  |  SCENE=  }}
+==Crystal structure of the catalytic domain of bovine beta1,4-galactosyltransferase complex with UDP-galactose==
+<StructureSection load='1o0r' size='340' side='right'caption='[[1o0r]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-===Crystal structure of the catalytic domain of bovine beta1,4-galactosyltransferase complex with UDP-galactose===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1o0r]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1kyb 1kyb]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1O0R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1O0R FirstGlance]. <br>
-{{ABSTRACT_PUBMED_12051854}}
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DIO:1,4-DIETHYLENE+DIOXIDE'>DIO</scene>, <scene name='pdbligand=GDU:GALACTOSE-URIDINE-5-DIPHOSPHATE'>GDU</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-==About this Structure==
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1o0r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1o0r OCA], [https://pdbe.org/1o0r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1o0r RCSB], [https://www.ebi.ac.uk/pdbsum/1o0r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1o0r ProSAT]</span></td></tr>
-[[1o0r]] is a 2 chain structure of [[Galactosyltransferase]] with sequence from [http://en.wikipedia.org/wiki/Thermomicrobium_roseum Thermomicrobium roseum]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1kyb 1kyb]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1O0R OCA].
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/B4GT1_BOVIN B4GT1_BOVIN] The Golgi complex form catalyzes the production of lactose in the lactating mammary gland and could also be responsible for the synthesis of complex-type N-linked oligosaccharides in many glycoproteins as well as the carbohydrate moieties of glycolipids.  The cell surface form functions as a recognition molecule during a variety of cell to cell and cell to matrix interactions, as those occurring during development and egg fertilization, by binding to specific oligosaccharide ligands on opposing cells or in the extracellular matrix.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o0/1o0r_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1o0r ConSurf].
+<div style="clear:both"></div>
 ==See Also==
-*[[Galactosyltransferase|Galactosyltransferase]]
+*[[Glycosyltransferase 3D structures|Glycosyltransferase 3D structures]]
+__TOC__
-==Reference==
+</StructureSection>
-<ref group="xtra">PMID:012051854</ref><references group="xtra"/>
+[[Category: Bos taurus]]
-[[Category: N-acetyllactosamine synthase]]
+[[Category: Large Structures]]
-[[Category: Thermomicrobium roseum]]
+[[Category: Balaji PV]]
-[[Category: Balaji, P V.]]
+[[Category: Qasba PK]]
-[[Category: Qasba, P K.]]
+[[Category: Ramakrishnan B]]
-[[Category: Ramakrishnan, B.]]
-[[Category: 4-galactosyltransferase]]
-[[Category: Beta1]]
-[[Category: Conformation ii]]
-[[Category: Transferase]]
-[[Category: Udp-gal]]