1nf2: Difference between revisions

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[[Image:1nf2.png|left|200px]]


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==X-ray crystal structure of TM0651 from Thermotoga maritima==
The line below this paragraph, containing "STRUCTURE_1nf2", creates the "Structure Box" on the page.
<StructureSection load='1nf2' size='340' side='right'caption='[[1nf2]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1nf2]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NF2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NF2 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_1nf2|  PDB=1nf2  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1nf2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nf2 OCA], [https://pdbe.org/1nf2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1nf2 RCSB], [https://www.ebi.ac.uk/pdbsum/1nf2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1nf2 ProSAT], [https://www.topsan.org/Proteins/BSGC/1nf2 TOPSAN]</span></td></tr>
 
</table>
===X-ray crystal structure of TM0651 from Thermotoga maritima===
== Function ==
 
[https://www.uniprot.org/uniprot/Q9WZB9_THEMA Q9WZB9_THEMA]
 
== Evolutionary Conservation ==
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The line below this paragraph, {{ABSTRACT_PUBMED_12824492}}, adds the Publication Abstract to the page
Check<jmol>
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nf/1nf2_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_12824492}}
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    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
1NF2 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NF2 OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1nf2 ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
Crystal structure of a phosphatase with a unique substrate binding domain from Thermotoga maritima., Shin DH, Roberts A, Jancarik J, Yokota H, Kim R, Wemmer DE, Kim SH, Protein Sci. 2003 Jul;12(7):1464-72. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12824492 12824492]
</StructureSection>
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Thermotoga maritima]]
[[Category: Thermotoga maritima]]
[[Category: BSGC, Berkeley Structural Genomics Center.]]
[[Category: Shin DH]]
[[Category: Shin, D H.]]
[[Category: Berkeley structural genomics center]]
[[Category: Bsgc structure funded by nih]]
[[Category: Had family]]
[[Category: New fold]]
[[Category: Phosphatase]]
[[Category: Protein structure initiative]]
[[Category: Psi]]
[[Category: Structural genomic]]
[[Category: Structural proteomic]]
[[Category: Thermotoga maritima]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 03:47:41 2008''

Latest revision as of 11:49, 10 April 2024

X-ray crystal structure of TM0651 from Thermotoga maritimaX-ray crystal structure of TM0651 from Thermotoga maritima

Structural highlights

1nf2 is a 3 chain structure with sequence from Thermotoga maritima. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.2Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q9WZB9_THEMA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1nf2, resolution 2.20Å

Drag the structure with the mouse to rotate

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OCA
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