User:Mark Macbeth/Sandbox10: Difference between revisions

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=This is my new favorite protein=
=This is my new favorite protein=
<StructureSection load='1stp' size='340' side='right' caption='Caption for this structure' scene=''>
<StructureSection load='6lzg' size='340' side='right' caption='Caption for this structure' scene='87/877511/First_scene/1'>
This is a default text for your page '''Mark Macbeth/Sandbox10'''. Click above on '''edit this page''' to modify. Be careful with the &lt; and &gt; signs.
This is a default text for your page '''Mark Macbeth/Sandbox10'''. Click above on '''edit this page''' to modify. Be careful with the &lt; and &gt; signs.
You may include any references to papers as in: the use of JSmol in Proteopedia <ref>DOI 10.1002/ijch.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue.
You may include any references to papers as in: the use of JSmol in Proteopedia <ref>DOI 10.1002/ijch.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue.


== Function ==
== Function ==
<scene name='87/877511/First_scene/1'>Check it out</scene>
<scene name='87/877511/Second_scene/1'>This too</scene>
<scene name='87/877511/Second_scene/2'>TextToBeDisplayed</scene>
<scene name='78/786673/Gal_overal_view/1'>GAL</scene>
<scene name='10/1037520/Hydrophobic_pocket/3'>TextToBeDisplayed</scene>


== Disease ==
== Disease ==
[[Image:markmtest.png|450px|right|thumb|Figure 1. Mark's spike]]<ref name=”Ransey”>PMID:28504306</ref>
[[Image:markmtest.png|450px|right|thumb|Figure 1. Mark's spike]]<ref name="Safarian">PMID: 31604309</ref><ref name="Ransey">PMID:28504306</ref>
== Relevance ==
== Relevance ==
 
<ref name="Safarian"/><ref name="Ransey"/>
== Structural highlights ==
== Structural highlights ==


This is a sample scene created with SAT to <scene name="/12/3456/Sample/1">color</scene> by Group, and another to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes.<ref name="Ransey" />
This is a sample scene created with SAT to <scene name="/12/3456/Sample/1">color</scene> by Group, and another to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes.<ref name="Safarian"/><ref name="Ransey"/>


</StructureSection>
== References ==
== References ==
<references/>
<references/>
</StructureSection>

Latest revision as of 21:05, 4 April 2024

This is my new favorite proteinThis is my new favorite protein

This is a default text for your page Mark Macbeth/Sandbox10. Click above on edit this page to modify. Be careful with the < and > signs.

You may include any references to papers as in: the use of JSmol in Proteopedia [1] or to the article describing Jmol [2] to the rescue.

Function

Disease

Figure 1. Mark's spike

[3][4]

Relevance

[3][4]

Structural highlights

This is a sample scene created with SAT to by Group, and another to make of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes.[3][4]

References

  1. ↑ Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
  2. ↑ Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644
  3. ↑ 3.0 3.1 3.2 Safarian S, Hahn A, Mills DJ, Radloff M, Eisinger ML, Nikolaev A, Meier-Credo J, Melin F, Miyoshi H, Gennis RB, Sakamoto J, Langer JD, Hellwig P, Kuhlbrandt W, Michel H. Active site rearrangement and structural divergence in prokaryotic respiratory oxidases. Science. 2019 Oct 4;366(6461):100-104. doi: 10.1126/science.aay0967. PMID:31604309 doi:http://dx.doi.org/10.1126/science.aay0967
  4. ↑ 4.0 4.1 4.2 Ransey E, Paredes E, Dey SK, Das SR, Heroux A, Macbeth MR. Crystal structure of the Entamoeba histolytica RNA lariat debranching enzyme EhDbr1 reveals a catalytic Zn(2+) /Mn(2+) heterobinucleation. FEBS Lett. 2017 Jul;591(13):2003-2010. doi: 10.1002/1873-3468.12677. Epub 2017, Jun 14. PMID:28504306 doi:http://dx.doi.org/10.1002/1873-3468.12677


Caption for this structure

Drag the structure with the mouse to rotate
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