1jg8: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-[[Image:1jg8.gif|left|200px]]<br /><applet load="1jg8" size="450" color="white" frame="true" align="right" spinBox="true"
-caption="1jg8, resolution 1.80&Aring;" />
-'''Crystal Structure of Threonine Aldolase (Low-specificity)'''<br />
-==About this Structure==
+==Crystal Structure of Threonine Aldolase (Low-specificity)==
-JG8 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima] with CA and NA as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Threonine_aldolase Threonine aldolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.2.5 4.1.2.5] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1JG8 OCA].
+<StructureSection load='1jg8' size='340' side='right'caption='[[1jg8]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-[[Category: Single protein]]
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1jg8]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JG8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JG8 FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=LLP:(2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL]METHYLIDENEAMINO]HEXANOIC+ACID'>LLP</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jg8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jg8 OCA], [https://pdbe.org/1jg8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jg8 RCSB], [https://www.ebi.ac.uk/pdbsum/1jg8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jg8 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1jg8 TOPSAN]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q9X266_THEMA Q9X266_THEMA]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jg/1jg8_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jg8 ConSurf].
+<div style="clear:both"></div>
+==See Also==
+*[[Aldolase 3D structures|Aldolase 3D structures]]
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Thermotoga maritima]]
-[[Category: Threonine aldolase]]
+[[Category: Bonanno J]]
-[[Category: Bonanno, J.]]
+[[Category: Burley SK]]
-[[Category: Burley, S.K.]]
+[[Category: Kielkopf CL]]
-[[Category: Kielkopf, C.L.]]
+[[Category: Ray S]]
-[[Category: NYSGXRC, New.York.Structural.GenomiX.Research.Consortium.]]
-[[Category: Ray, S.]]
-[[Category: CA]]
-[[Category: NA]]
-[[Category: calcium binding site]]
-[[Category: glycine biosynthesis]]
-[[Category: new york structural genomix research consortium]]
-[[Category: nysgxrc]]
-[[Category: protein structure initiative]]
-[[Category: psi]]
-[[Category: pyridoxal-5'-phosphate]]
-[[Category: structural genomics]]
-[[Category: threonine aldolase]]
-''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Sat Nov 24 23:35:53 2007''