1j79: Difference between revisions

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[[Image:1j79.png|left|200px]]


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==Molecular Structure of Dihydroorotase: A Paradigm for Catalysis Through the Use of a Binuclear Metal Center==
The line below this paragraph, containing "STRUCTURE_1j79", creates the "Structure Box" on the page.
<StructureSection load='1j79' size='340' side='right'caption='[[1j79]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1j79]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J79 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1J79 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene>, <scene name='pdbligand=NCD:N-CARBAMOYL-L-ASPARTATE'>NCD</scene>, <scene name='pdbligand=ORO:OROTIC+ACID'>ORO</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_1j79|  PDB=1j79 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j79 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j79 OCA], [https://pdbe.org/1j79 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j79 RCSB], [https://www.ebi.ac.uk/pdbsum/1j79 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j79 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/PYRC_ECOLI PYRC_ECOLI]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j7/1j79_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1j79 ConSurf].
<div style="clear:both"></div>


===Molecular Structure of Dihydroorotase: A Paradigm for Catalysis Through the Use of a Binuclear Metal Center===
==See Also==
 
*[[Dihydroorotase 3D structures|Dihydroorotase 3D structures]]
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_11401542}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 11401542 is the PubMed ID number.
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{{ABSTRACT_PUBMED_11401542}}
 
==About this Structure==
1J79 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J79 OCA].
 
==Reference==
<ref group="xtra">PMID:11401542</ref><references group="xtra"/>
[[Category: Dihydroorotase]]
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Holden, H M.]]
[[Category: Large Structures]]
[[Category: Jr., G N.Phillips.]]
[[Category: Holden HM]]
[[Category: Neal, T M.]]
[[Category: Neal TM]]
[[Category: Raushel, F M.]]
[[Category: Phillips Jr GN]]
[[Category: Thoden, J B.]]
[[Category: Raushel FM]]
[[Category: Metalloenzyme]]
[[Category: Thoden JB]]
[[Category: Pyrimidine biosynthesis]]
[[Category: Tim barrel]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 17:47:28 2009''

Latest revision as of 10:49, 3 April 2024

Molecular Structure of Dihydroorotase: A Paradigm for Catalysis Through the Use of a Binuclear Metal CenterMolecular Structure of Dihydroorotase: A Paradigm for Catalysis Through the Use of a Binuclear Metal Center

Structural highlights

1j79 is a 2 chain structure with sequence from Escherichia coli. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.7Å
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

PYRC_ECOLI

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1j79, resolution 1.70Å

Drag the structure with the mouse to rotate

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OCA
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