1i2e: Difference between revisions

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-{{Seed}}
-[[Image:1i2e.png|left|200px]]
-<!--
+==Ribonuclease T1 V16A mutant, form I==
-The line below this paragraph, containing "STRUCTURE_1i2e", creates the "Structure Box" on the page.
+<StructureSection load='1i2e' size='340' side='right'caption='[[1i2e]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1i2e]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aspergillus_oryzae Aspergillus oryzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1I2E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1I2E FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=2GP:GUANOSINE-2-MONOPHOSPHATE'>2GP</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-{{STRUCTURE_1i2e|  PDB=1i2e  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1i2e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1i2e OCA], [https://pdbe.org/1i2e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1i2e RCSB], [https://www.ebi.ac.uk/pdbsum/1i2e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1i2e ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/RNT1_ASPOR RNT1_ASPOR]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i2/1i2e_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1i2e ConSurf].
+<div style="clear:both"></div>
-===Ribonuclease T1 V16A mutant, form I===
+==See Also==
+*[[Ribonuclease 3D structures|Ribonuclease 3D structures]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_11513591}}, adds the Publication Abstract to the page
-(as it appears on PubMed at http://www.pubmed.gov), where 11513591 is the PubMed ID number.
--->
-{{ABSTRACT_PUBMED_11513591}}
-==About this Structure==
-I2E is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Aspergillus_oryzae Aspergillus oryzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1I2E OCA].
-==Reference==
-Hydrophobic core manipulations in ribonuclease T1., De Vos S, Backmann J, Prevost M, Steyaert J, Loris R, Biochemistry. 2001 Aug 28;40(34):10140-9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11513591 11513591]
 [[Category: Aspergillus oryzae]]
-[[Category: Single protein]]
+[[Category: Large Structures]]
-[[Category: Backmann, J.]]
+[[Category: Backmann J]]
-[[Category: Loris, R.]]
+[[Category: De Vos S]]
-[[Category: Steyaert, J.]]
+[[Category: Loris R]]
-[[Category: Vos, S De.]]
+[[Category: Steyaert J]]
-[[Category: Cavity creation]]
-[[Category: Hydrophobic core packing]]
-[[Category: Ribonuclease]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul  1 10:18:35 2008''