2oek: Difference between revisions

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{{Seed}}
[[Image:2oek.png|left|200px]]


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==Crystal structure of a rubisco-like protein from Geobacillus kaustophilus liganded with Mg2+ ions==
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<StructureSection load='2oek' size='340' side='right'caption='[[2oek]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2oek]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_kaustophilus Geobacillus kaustophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OEK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OEK FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
{{STRUCTURE_2oek|  PDB=2oek  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2oek FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oek OCA], [https://pdbe.org/2oek PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2oek RCSB], [https://www.ebi.ac.uk/pdbsum/2oek PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2oek ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/MTNW_GEOKA MTNW_GEOKA] Catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P).<ref>PMID:17352497</ref>


===Crystal structure of a rubisco-like protein from Geobacillus kaustophilus liganded with Mg2+ ions===
==See Also==
 
*[[Enolase 3D structures|Enolase 3D structures]]
 
== References ==
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{{ABSTRACT_PUBMED_17352497}}
 
==About this Structure==
2OEK is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Geobacillus_kaustophilus Geobacillus kaustophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OEK OCA].
 
==Reference==
Mechanistic diversity in the RuBisCO superfamily: the "enolase" in the methionine salvage pathway in Geobacillus kaustophilus., Imker HJ, Fedorov AA, Fedorov EV, Almo SC, Gerlt JA, Biochemistry. 2007 Apr 3;46(13):4077-89. Epub 2007 Mar 13. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17352497 17352497]
[[Category: Geobacillus kaustophilus]]
[[Category: Geobacillus kaustophilus]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Almo, S C.]]
[[Category: Almo SC]]
[[Category: Fedorov, A A.]]
[[Category: Fedorov AA]]
[[Category: Fedorov, E V.]]
[[Category: Fedorov EV]]
[[Category: Gerlt, J A.]]
[[Category: Gerlt JA]]
[[Category: Imker, H J.]]
[[Category: Imker HJ]]
[[Category: Enolase]]
[[Category: Isomerase]]
[[Category: Rubisco-like protein]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 17:26:59 2008''

Latest revision as of 09:29, 3 April 2024

Crystal structure of a rubisco-like protein from Geobacillus kaustophilus liganded with Mg2+ ionsCrystal structure of a rubisco-like protein from Geobacillus kaustophilus liganded with Mg2+ ions

Structural highlights

2oek is a 2 chain structure with sequence from Geobacillus kaustophilus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.8Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

MTNW_GEOKA Catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P).[1]

See Also

References

  1. ↑ Imker HJ, Fedorov AA, Fedorov EV, Almo SC, Gerlt JA. Mechanistic diversity in the RuBisCO superfamily: the "enolase" in the methionine salvage pathway in Geobacillus kaustophilus. Biochemistry. 2007 Apr 3;46(13):4077-89. Epub 2007 Mar 13. PMID:17352497 doi:10.1021/bi7000483

2oek, resolution 1.80Å

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