2o1j: Difference between revisions

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-{{Seed}}
-[[Image:2o1j.png|left|200px]]
-<!--
+==Structure of the extended diarrhea-inducing domain of rotavirus enterotoxigenic protein NSP4==
-The line below this paragraph, containing "STRUCTURE_2o1j", creates the "Structure Box" on the page.
+<StructureSection load='2o1j' size='340' side='right'caption='[[2o1j]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2o1j]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Rotavirus_str._I321 Rotavirus str. I321]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O1J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O1J FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-{{STRUCTURE_2o1j|  PDB=2o1j  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o1j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o1j OCA], [https://pdbe.org/2o1j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o1j RCSB], [https://www.ebi.ac.uk/pdbsum/2o1j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o1j ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q9PYC1_9VIRU Q9PYC1_9VIRU]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o1/2o1j_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2o1j ConSurf].
+<div style="clear:both"></div>
-===Structure of the extended diarrhea-inducing domain of rotavirus enterotoxigenic protein NSP4===
+==See Also==
+*[[Nonstructural protein 3D structures|Nonstructural protein 3D structures]]
+__TOC__
-==About this Structure==
+</StructureSection>
-O1J is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Rotavirus Rotavirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O1J OCA].
+[[Category: Large Structures]]
-[[Category: Rotavirus]]
+[[Category: Rotavirus str. I321]]
-[[Category: Deepa, R.]]
+[[Category: Deepa R]]
-[[Category: Rao, C Durga.]]
+[[Category: Durga Rao C]]
-[[Category: Suguna, K.]]
+[[Category: Suguna K]]
-[[Category: Crystal structure]]
-[[Category: Non structural protein]]
-[[Category: Nsp4]]
-[[Category: Rotavirus enterotoxin]]
-[[Category: Tetrameric coiled coil]]
-[[Category: Virulence]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 20:15:37 2009''