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==Structure of the extended diarrhea-inducing domain of rotavirus enterotoxigenic protein NSP4== | ==Structure of the extended diarrhea-inducing domain of rotavirus enterotoxigenic protein NSP4== | ||
<StructureSection load='2o1j' size='340' side='right' caption='[[2o1j]], [[Resolution|resolution]] 2.70Å' scene=''> | <StructureSection load='2o1j' size='340' side='right'caption='[[2o1j]], [[Resolution|resolution]] 2.70Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2o1j]] is a 4 chain structure with sequence from [ | <table><tr><td colspan='2'>[[2o1j]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Rotavirus_str._I321 Rotavirus str. I321]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O1J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O1J FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7Å</td></tr> | ||
<tr id=' | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o1j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o1j OCA], [https://pdbe.org/2o1j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o1j RCSB], [https://www.ebi.ac.uk/pdbsum/2o1j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o1j ProSAT]</span></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | |||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/Q9PYC1_9VIRU Q9PYC1_9VIRU] | |||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o1/2o1j_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o1/2o1j_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2o1j ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
*[[Nonstructural protein|Nonstructural protein]] | *[[Nonstructural protein 3D structures|Nonstructural protein 3D structures]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Rotavirus str. | [[Category: Large Structures]] | ||
[[Category: Deepa | [[Category: Rotavirus str. I321]] | ||
[[Category: Rao | [[Category: Deepa R]] | ||
[[Category: Suguna | [[Category: Durga Rao C]] | ||
[[Category: Suguna K]] | |||
Latest revision as of 09:28, 3 April 2024
Structure of the extended diarrhea-inducing domain of rotavirus enterotoxigenic protein NSP4Structure of the extended diarrhea-inducing domain of rotavirus enterotoxigenic protein NSP4
Structural highlights
FunctionEvolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. See Also |
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