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[[Image:1xnr.png|left|200px]]


{{STRUCTURE_1xnr|  PDB=1xnr  |  SCENE=  }}
==Crystal Structure of an Inosine-Cytosine Wobble Base Pair in the Context of the Decoding Center==
 
<StructureSection load='1xnr' size='340' side='right'caption='[[1xnr]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
===Crystal Structure of an Inosine-Cytosine Wobble Base Pair in the Context of the Decoding Center===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[1xnr]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XNR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XNR FirstGlance]. <br>
{{ABSTRACT_PUBMED_15558050}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.1&#8491;</td></tr>
 
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PAR:PAROMOMYCIN'>PAR</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xnr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xnr OCA], [https://pdbe.org/1xnr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xnr RCSB], [https://www.ebi.ac.uk/pdbsum/1xnr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xnr ProSAT]</span></td></tr>
[[1xnr]] is a 23 chain structure of [[Ribosomal protein S10]], [[Ribosomal protein S11]], [[Ribosomal protein S12]], [[Ribosomal protein S13]], [[Ribosomal protein S14]], [[Ribosomal protein S15]], [[Ribosomal protein S16]], [[Ribosomal protein S17]], [[Ribosomal protein S18]], [[Ribosomal protein S19]], [[Ribosomal protein S2]], [[Ribosomal protein S20]], [[Ribosomal protein S3]], [[Ribosomal protein S4]], [[Ribosomal protein S5]], [[Ribosomal protein S6]], [[Ribosomal protein S7]], [[Ribosomal protein S8]], [[Ribosomal protein S9]] and [[Ribosomal protein THX]] with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XNR OCA].  
</table>
== Function ==
[https://www.uniprot.org/uniprot/RS2_THET8 RS2_THET8] Spans the head-body hinge region of the 30S subunit. Is loosely associated with the 30S subunit.[HAMAP-Rule:MF_00291_B]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xn/1xnr_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xnr ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Ribosomal protein S10|Ribosomal protein S10]]
*[[Ribosomal protein THX 3D structures|Ribosomal protein THX 3D structures]]
*[[Ribosomal protein S11|Ribosomal protein S11]]
*[[Ribosome 3D structures|Ribosome 3D structures]]
*[[Ribosomal protein S12|Ribosomal protein S12]]
*[[Transfer RNA (tRNA)|Transfer RNA (tRNA)]]
*[[Ribosomal protein S13|Ribosomal protein S13]]
__TOC__
*[[Ribosomal protein S14|Ribosomal protein S14]]
</StructureSection>
*[[Ribosomal protein S15|Ribosomal protein S15]]
[[Category: Large Structures]]
*[[Ribosomal protein S16|Ribosomal protein S16]]
*[[Ribosomal protein S17|Ribosomal protein S17]]
*[[Ribosomal protein S18|Ribosomal protein S18]]
*[[Ribosomal protein S19|Ribosomal protein S19]]
*[[Ribosomal protein S2|Ribosomal protein S2]]
*[[Ribosomal protein S20|Ribosomal protein S20]]
*[[Ribosomal protein S3|Ribosomal protein S3]]
*[[Ribosomal protein S4|Ribosomal protein S4]]
*[[Ribosomal protein S5|Ribosomal protein S5]]
*[[Ribosomal protein S6|Ribosomal protein S6]]
*[[Ribosomal protein S7|Ribosomal protein S7]]
*[[Ribosomal protein S8|Ribosomal protein S8]]
*[[Ribosomal protein S9|Ribosomal protein S9]]
*[[Ribosomal protein THX|Ribosomal protein THX]]
 
==Reference==
<ref group="xtra">PMID:015558050</ref><references group="xtra"/>
[[Category: Thermus thermophilus]]
[[Category: Thermus thermophilus]]
[[Category: Murphy, F V.]]
[[Category: Murphy FV]]
[[Category: Ramakrishnan, V.]]
[[Category: Ramakrishnan V]]
[[Category: 30]]
[[Category: Decoding]]
[[Category: Ribosome]]
[[Category: Translation]]
[[Category: Trna modification]]

Latest revision as of 09:19, 3 April 2024

Crystal Structure of an Inosine-Cytosine Wobble Base Pair in the Context of the Decoding CenterCrystal Structure of an Inosine-Cytosine Wobble Base Pair in the Context of the Decoding Center

Structural highlights

1xnr is a 10 chain structure with sequence from Thermus thermophilus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 3.1Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

RS2_THET8 Spans the head-body hinge region of the 30S subunit. Is loosely associated with the 30S subunit.[HAMAP-Rule:MF_00291_B]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1xnr, resolution 3.10Å

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