1ud5: Difference between revisions
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==Crystal structure of AmyK38 with rubidium ion== | |||
<StructureSection load='1ud5' size='340' side='right'caption='[[1ud5]], [[Resolution|resolution]] 2.70Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[1ud5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_sp._KSM-K38 Bacillus sp. KSM-K38]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UD5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UD5 FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=RB:RUBIDIUM+ION'>RB</scene></td></tr> | |||
== | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ud5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ud5 OCA], [https://pdbe.org/1ud5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ud5 RCSB], [https://www.ebi.ac.uk/pdbsum/1ud5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ud5 ProSAT]</span></td></tr> | ||
[[1ud5]] is a 1 chain structure with sequence from [ | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/Q93I48_9BACI Q93I48_9BACI] | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ud/1ud5_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ud5 ConSurf]. | |||
<div style="clear:both"></div> | |||
==See Also== | ==See Also== | ||
*[[ | *[[Amylase 3D structures|Amylase 3D structures]] | ||
__TOC__ | |||
</StructureSection> | |||
[[Category: Bacillus sp. KSM-K38]] | |||
[[Category: | [[Category: Large Structures]] | ||
[[Category: | [[Category: Fujihashi M]] | ||
[[Category: Fujihashi | [[Category: Hagihara H]] | ||
[[Category: Hagihara | [[Category: Ito S]] | ||
[[Category: Ito | [[Category: Kita A]] | ||
[[Category: Kita | [[Category: Miki K]] | ||
[[Category: Miki | [[Category: Nonaka T]] | ||
[[Category: Nonaka | [[Category: Ozaki K]] | ||
[[Category: Ozaki | |||
Latest revision as of 09:16, 3 April 2024
Crystal structure of AmyK38 with rubidium ionCrystal structure of AmyK38 with rubidium ion
Structural highlights
FunctionEvolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. See Also |
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