1qfy: Difference between revisions

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-{{Seed}}
-[[Image:1qfy.png|left|200px]]
-<!--
+==PEA FNR Y308S MUTANT IN COMPLEX WITH NADP+==
-The line below this paragraph, containing "STRUCTURE_1qfy", creates the "Structure Box" on the page.
+<StructureSection load='1qfy' size='340' side='right'caption='[[1qfy]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1qfy]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pisum_sativum Pisum sativum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QFY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1QFY FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-{{STRUCTURE_1qfy|  PDB=1qfy  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1qfy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qfy OCA], [https://pdbe.org/1qfy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1qfy RCSB], [https://www.ebi.ac.uk/pdbsum/1qfy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1qfy ProSAT]</span></td></tr>
+</table>
-===PEA FNR Y308S MUTANT IN COMPLEX WITH NADP+===
+== Function ==
+[https://www.uniprot.org/uniprot/FENR1_PEA FENR1_PEA] May play a key role in regulating the relative amounts of cyclic and non-cyclic electron flow to meet the demands of the plant for ATP and reducing power.
+== Evolutionary Conservation ==
-<!--
+[[Image:Consurf_key_small.gif|200px|right]]
-The line below this paragraph, {{ABSTRACT_PUBMED_10467097}}, adds the Publication Abstract to the page
+Check<jmol>
-(as it appears on PubMed at http://www.pubmed.gov), where 10467097 is the PubMed ID number.
+  <jmolCheckbox>
--->
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qf/1qfy_consurf.spt"</scriptWhenChecked>
-{{ABSTRACT_PUBMED_10467097}}
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
-==About this Structure==
+  </jmolCheckbox>
-QFY is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pisum_sativum Pisum sativum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QFY OCA].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1qfy ConSurf].
+<div style="clear:both"></div>
-==Reference==
+__TOC__
-A productive NADP+ binding mode of ferredoxin-NADP + reductase revealed by protein engineering and crystallographic studies., Deng Z, Aliverti A, Zanetti G, Arakaki AK, Ottado J, Orellano EG, Calcaterra NB, Ceccarelli EA, Carrillo N, Karplus PA, Nat Struct Biol. 1999 Sep;6(9):847-53. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10467097 10467097]
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Pisum sativum]]
-[[Category: Single protein]]
+[[Category: Aliverti A]]
-[[Category: Aliverti, A.]]
+[[Category: Arakaki AK]]
-[[Category: Arakaki, A K.]]
+[[Category: Calcaterra NB]]
-[[Category: Calcaterra, N B.]]
+[[Category: Carrillo N]]
-[[Category: Carrillo, N.]]
+[[Category: Ceccarelli EA]]
-[[Category: Ceccarelli, E A.]]
+[[Category: Deng Z]]
-[[Category: Deng, Z.]]
+[[Category: Karplus PA]]
-[[Category: Karplus, P A.]]
+[[Category: Orellano EG]]
-[[Category: Orellano, E G.]]
+[[Category: Ottado J]]
-[[Category: Ottado, J.]]
+[[Category: Zanetti G]]
-[[Category: Zanetti, G.]]
-[[Category: Electron transfer]]
-[[Category: Flavoenzyme]]
-[[Category: Hydride transfer]]
-[[Category: Photosynthesis]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 23:57:14 2008''