1j2p: Difference between revisions

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-{{Seed}}
-[[Image:1j2p.png|left|200px]]
-<!--
+==alpha-ring from the proteasome from archaeoglobus fulgidus==
-The line below this paragraph, containing "STRUCTURE_1j2p", creates the "Structure Box" on the page.
+<StructureSection load='1j2p' size='340' side='right'caption='[[1j2p]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1j2p]] is a 7 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J2P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1J2P FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
--->
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j2p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j2p OCA], [https://pdbe.org/1j2p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j2p RCSB], [https://www.ebi.ac.uk/pdbsum/1j2p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j2p ProSAT]</span></td></tr>
-{{STRUCTURE_1j2p|  PDB=1j2p  |  SCENE=  }}
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/PSA_ARCFU PSA_ARCFU] Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation (By similarity).[HAMAP-Rule:MF_00289_A]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j2/1j2p_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1j2p ConSurf].
+<div style="clear:both"></div>
-===alpha-ring from the proteasome from archaeoglobus fulgidus===
+==See Also==
+*[[Proteasome 3D structures|Proteasome 3D structures]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_12614609}}, adds the Publication Abstract to the page
-(as it appears on PubMed at http://www.pubmed.gov), where 12614609 is the PubMed ID number.
--->
-{{ABSTRACT_PUBMED_12614609}}
-==About this Structure==
-J2P is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J2P OCA].
-==Reference==
-Investigations on the maturation and regulation of archaebacterial proteasomes., Groll M, Brandstetter H, Bartunik H, Bourenkow G, Huber R, J Mol Biol. 2003 Mar 14;327(1):75-83. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12614609 12614609]
 [[Category: Archaeoglobus fulgidus]]
-[[Category: Proteasome endopeptidase complex]]
+[[Category: Large Structures]]
-[[Category: Single protein]]
+[[Category: Bartunik H]]
-[[Category: Bartunik, H.]]
+[[Category: Bourenkow G]]
-[[Category: Bourenkow, G.]]
+[[Category: Brandstetter H]]
-[[Category: Brandstetter, H.]]
+[[Category: Groll M]]
-[[Category: Groll, M.]]
+[[Category: Huber R]]
-[[Category: Huber, R.]]
-[[Category: Alpha-ring]]
-[[Category: Proteasome]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul  1 14:24:43 2008''