1ciw: Difference between revisions

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{{Seed}}
[[Image:1ciw.png|left|200px]]


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==PEANUT LECTIN COMPLEXED WITH N-ACETYLLACTOSAMINE==
The line below this paragraph, containing "STRUCTURE_1ciw", creates the "Structure Box" on the page.
<StructureSection load='1ciw' size='340' side='right'caption='[[1ciw]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1ciw]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Arachis_hypogaea Arachis hypogaea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CIW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1CIW FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene>, <scene name='pdbligand=PRD_900019:N-acetyl-alpha-lactosamine'>PRD_900019</scene></td></tr>
{{STRUCTURE_1ciw| PDB=1ciw |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ciw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ciw OCA], [https://pdbe.org/1ciw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ciw RCSB], [https://www.ebi.ac.uk/pdbsum/1ciw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ciw ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/LECG_ARAHY LECG_ARAHY] D-galactose specific lectin.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ci/1ciw_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ciw ConSurf].
<div style="clear:both"></div>


===PEANUT LECTIN COMPLEXED WITH N-ACETYLLACTOSAMINE===
==See Also==
 
*[[Agglutinin 3D structures|Agglutinin 3D structures]]
 
*[[Galactose-binding lectin|Galactose-binding lectin]]
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</StructureSection>
(as it appears on PubMed at http://www.pubmed.gov), where 10417405 is the PubMed ID number.
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{{ABSTRACT_PUBMED_10417405}}
 
==About this Structure==
1CIW is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Arachis_hypogaea Arachis hypogaea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CIW OCA].
 
==Reference==
Structures of the complexes of peanut lectin with methyl-beta-galactose and N-acetyllactosamine and a comparative study of carbohydrate binding in Gal/GalNAc-specific legume lectins., Ravishankar R, Suguna K, Surolia A, Vijayan M, Acta Crystallogr D Biol Crystallogr. 1999 Aug;55(Pt 8):1375-82. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10417405 10417405]
[[Category: Arachis hypogaea]]
[[Category: Arachis hypogaea]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Ravishankar, R.]]
[[Category: Ravishankar R]]
[[Category: Suguna, K.]]
[[Category: Suguna K]]
[[Category: Surolia, A.]]
[[Category: Surolia A]]
[[Category: Vijayan, M.]]
[[Category: Vijayan M]]
[[Category: Agglutinin]]
[[Category: Carbohydrate specificity]]
[[Category: Lectin]]
[[Category: Legume lectin]]
[[Category: N- acetyllactosamine]]
[[Category: Protein crystallography]]
[[Category: Water bridge]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 20:48:31 2008''

Latest revision as of 08:57, 3 April 2024

PEANUT LECTIN COMPLEXED WITH N-ACETYLLACTOSAMINEPEANUT LECTIN COMPLEXED WITH N-ACETYLLACTOSAMINE

Structural highlights

1ciw is a 4 chain structure with sequence from Arachis hypogaea. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.7Å
Ligands:, , , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

LECG_ARAHY D-galactose specific lectin.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1ciw, resolution 2.70Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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