1ciw: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-[[Image:1ciw.png|left|200px]]
-{{STRUCTURE_1ciw|  PDB=1ciw  |  SCENE=  }}
+==PEANUT LECTIN COMPLEXED WITH N-ACETYLLACTOSAMINE==
+<StructureSection load='1ciw' size='340' side='right'caption='[[1ciw]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1ciw]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Arachis_hypogaea Arachis hypogaea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CIW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1CIW FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene>, <scene name='pdbligand=PRD_900019:N-acetyl-alpha-lactosamine'>PRD_900019</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ciw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ciw OCA], [https://pdbe.org/1ciw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ciw RCSB], [https://www.ebi.ac.uk/pdbsum/1ciw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ciw ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/LECG_ARAHY LECG_ARAHY] D-galactose specific lectin.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ci/1ciw_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ciw ConSurf].
+<div style="clear:both"></div>
-===PEANUT LECTIN COMPLEXED WITH N-ACETYLLACTOSAMINE===
+==See Also==
+*[[Agglutinin 3D structures|Agglutinin 3D structures]]
-{{ABSTRACT_PUBMED_10417405}}
+*[[Galactose-binding lectin|Galactose-binding lectin]]
+__TOC__
-==About this Structure==
+</StructureSection>
-[[1ciw]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Arachis_hypogaea Arachis hypogaea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CIW OCA].
-==Reference==
-<ref group="xtra">PMID:010417405</ref><references group="xtra"/>
 [[Category: Arachis hypogaea]]
-[[Category: Ravishankar, R.]]
+[[Category: Large Structures]]
-[[Category: Suguna, K.]]
+[[Category: Ravishankar R]]
-[[Category: Surolia, A.]]
+[[Category: Suguna K]]
-[[Category: Vijayan, M.]]
+[[Category: Surolia A]]
-[[Category: Agglutinin]]
+[[Category: Vijayan M]]
-[[Category: Carbohydrate specificity]]
-[[Category: Lectin]]
-[[Category: Legume lectin]]
-[[Category: N- acetyllactosamine]]
-[[Category: Protein crystallography]]
-[[Category: Sugar binding protein]]
-[[Category: Water bridge]]