1h58: Difference between revisions

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-{{Seed}}
-[[Image:1h58.png|left|200px]]
-<!--
+==STRUCTURE OF FERROUS HORSERADISH PEROXIDASE C1A==
-The line below this paragraph, containing "STRUCTURE_1h58", creates the "Structure Box" on the page.
+<StructureSection load='1h58' size='340' side='right'caption='[[1h58]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1h58]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Armoracia_rusticana Armoracia rusticana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1H58 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1H58 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-{{STRUCTURE_1h58|  PDB=1h58  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1h58 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1h58 OCA], [https://pdbe.org/1h58 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1h58 RCSB], [https://www.ebi.ac.uk/pdbsum/1h58 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1h58 ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/PER1A_ARMRU PER1A_ARMRU] Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h5/1h58_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1h58 ConSurf].
+<div style="clear:both"></div>
-===STRUCTURE OF FERROUS HORSERADISH PEROXIDASE C1A===
+==See Also==
+*[[Horseradish peroxidase|Horseradish peroxidase]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_12024218}}, adds the Publication Abstract to the page
-(as it appears on PubMed at http://www.pubmed.gov), where 12024218 is the PubMed ID number.
--->
-{{ABSTRACT_PUBMED_12024218}}
-==About this Structure==
-H58 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Armoracia_rusticana Armoracia rusticana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1H58 OCA].
-==Reference==
-The catalytic pathway of horseradish peroxidase at high resolution., Berglund GI, Carlsson GH, Smith AT, Szoke H, Henriksen A, Hajdu J, Nature. 2002 May 23;417(6887):463-8. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12024218 12024218]
 [[Category: Armoracia rusticana]]
-[[Category: Peroxidase]]
+[[Category: Large Structures]]
-[[Category: Single protein]]
+[[Category: Berglund GI]]
-[[Category: Berglund, G I.]]
+[[Category: Carlsson GH]]
-[[Category: Carlsson, G H.]]
+[[Category: Hajdu J]]
-[[Category: Hajdu, J.]]
+[[Category: Henriksen A]]
-[[Category: Henriksen, A.]]
+[[Category: Smith AT]]
-[[Category: Smith, A T.]]
+[[Category: Szoke H]]
-[[Category: Szoke, H.]]
-[[Category: Ferrous state]]
-[[Category: Horseradish]]
-[[Category: Oxidoreductase]]
-[[Category: Peroxidase]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul  1 06:38:40 2008''