1h57: Difference between revisions

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[[Image:1h57.png|left|200px]]


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==Structure of horseradish peroxidase C1A compound III==
The line below this paragraph, containing "STRUCTURE_1h57", creates the "Structure Box" on the page.
<StructureSection load='1h57' size='340' side='right'caption='[[1h57]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1h57]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Armoracia_rusticana Armoracia rusticana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1H57 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1H57 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=OXY:OXYGEN+MOLECULE'>OXY</scene>, <scene name='pdbligand=PEO:HYDROGEN+PEROXIDE'>PEO</scene></td></tr>
{{STRUCTURE_1h57| PDB=1h57 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1h57 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1h57 OCA], [https://pdbe.org/1h57 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1h57 RCSB], [https://www.ebi.ac.uk/pdbsum/1h57 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1h57 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/PER1A_ARMRU PER1A_ARMRU] Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h5/1h57_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1h57 ConSurf].
<div style="clear:both"></div>


===STRUCTURE OF HORSERADISH PEROXIDASE C1A COMPOUND III===
==See Also==
 
*[[Horseradish peroxidase|Horseradish peroxidase]]
 
__TOC__
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</StructureSection>
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{{ABSTRACT_PUBMED_12024218}}
 
==About this Structure==
1H57 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Armoracia_rusticana Armoracia rusticana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1H57 OCA].
 
==Reference==
<ref group="xtra">PMID:12024218</ref><references group="xtra"/>
[[Category: Armoracia rusticana]]
[[Category: Armoracia rusticana]]
[[Category: Peroxidase]]
[[Category: Large Structures]]
[[Category: Berglund, G I.]]
[[Category: Berglund GI]]
[[Category: Carlsson, G H.]]
[[Category: Carlsson GH]]
[[Category: Hajdu, J.]]
[[Category: Hajdu J]]
[[Category: Henriksen, A.]]
[[Category: Smith, A T.]]
[[Category: Szoke, H.]]
[[Category: Catalytic intermediate]]
[[Category: Compound iii]]
[[Category: Horseradish]]
[[Category: Oxidoreductase]]
[[Category: Oxyperoxidase]]
[[Category: Peroxidase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 03:58:57 2009''

Latest revision as of 14:28, 27 March 2024

Structure of horseradish peroxidase C1A compound IIIStructure of horseradish peroxidase C1A compound III

Structural highlights

1h57 is a 1 chain structure with sequence from Armoracia rusticana. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.6Å
Ligands:, , , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

PER1A_ARMRU Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1h57, resolution 1.60Å

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