1gpx: Difference between revisions

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{{Seed}}
[[Image:1gpx.png|left|200px]]


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==C85S GAPDX, NMR, 20 STRUCTURES==
The line below this paragraph, containing "STRUCTURE_1gpx", creates the "Structure Box" on the page.
<StructureSection load='1gpx' size='340' side='right'caption='[[1gpx]]' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1gpx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GPX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1GPX FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GA:GALLIUM+(III)+ION'>GA</scene></td></tr>
{{STRUCTURE_1gpx| PDB=1gpx |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1gpx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gpx OCA], [https://pdbe.org/1gpx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1gpx RCSB], [https://www.ebi.ac.uk/pdbsum/1gpx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1gpx ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/PUTX_PSEPU PUTX_PSEPU] The oxidation of camphor by cytochrome P450-CAM requires the participation of a flavoprotein, putidaredoxin reductase, and an iron-sulfur protein, putidaredoxin, to mediate the transfer of electrons from NADH to P450 for oxygen activation.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gp/1gpx_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1gpx ConSurf].
<div style="clear:both"></div>


===C85S GAPDX, NMR, 20 STRUCTURES===
==See Also==
 
*[[Ferredoxin 3D structures|Ferredoxin 3D structures]]
 
__TOC__
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[[Category: Large Structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 9835048 is the PubMed ID number.
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{{ABSTRACT_PUBMED_9835048}}
 
==About this Structure==
1GPX is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GPX OCA].
 
==Reference==
The solution structure of a gallium-substituted putidaredoxin mutant: GaPdx C85S., Pochapsky TC, Kuti M, Kazanis S, J Biomol NMR. 1998 Oct;12(3):407-15. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9835048 9835048]
[[Category: Pseudomonas putida]]
[[Category: Pseudomonas putida]]
[[Category: Single protein]]
[[Category: Kazanis S]]
[[Category: Kazanis, S.]]
[[Category: Kuti M]]
[[Category: Kuti, M.]]
[[Category: Pochapsky TC]]
[[Category: Pochapsky, T C.]]
[[Category: 20 structures aligned and sa]]
[[Category: Electron transport]]
[[Category: Gapdx c85]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul  1 05:43:26 2008''

Latest revision as of 14:23, 27 March 2024

C85S GAPDX, NMR, 20 STRUCTURESC85S GAPDX, NMR, 20 STRUCTURES

Structural highlights

1gpx is a 1 chain structure with sequence from Pseudomonas putida. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:Solution NMR
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

PUTX_PSEPU The oxidation of camphor by cytochrome P450-CAM requires the participation of a flavoprotein, putidaredoxin reductase, and an iron-sulfur protein, putidaredoxin, to mediate the transfer of electrons from NADH to P450 for oxygen activation.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

Drag the structure with the mouse to rotate

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