1glm: Difference between revisions

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[[Image:1glm.png|left|200px]]


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==REFINED CRYSTAL STRUCTURES OF GLUCOAMYLASE FROM ASPERGILLUS AWAMORI VAR. X100==
The line below this paragraph, containing "STRUCTURE_1glm", creates the "Structure Box" on the page.
<StructureSection load='1glm' size='340' side='right'caption='[[1glm]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1glm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aspergillus_awamori Aspergillus awamori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GLM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1GLM FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
{{STRUCTURE_1glm|  PDB=1glm |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1glm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1glm OCA], [https://pdbe.org/1glm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1glm RCSB], [https://www.ebi.ac.uk/pdbsum/1glm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1glm ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/AMYG_ASPAW AMYG_ASPAW]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gl/1glm_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1glm ConSurf].
<div style="clear:both"></div>


===REFINED CRYSTAL STRUCTURES OF GLUCOAMYLASE FROM ASPERGILLUS AWAMORI VAR. X100===
==See Also==
 
*[[Alpha-glucosidase 3D structures|Alpha-glucosidase 3D structures]]
 
*[[Amylase 3D structures|Amylase 3D structures]]
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{{ABSTRACT_PUBMED_8176747}}
 
==About this Structure==
1GLM is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Aspergillus_awamori Aspergillus awamori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GLM OCA].
 
==Reference==
Refined crystal structures of glucoamylase from Aspergillus awamori var. X100., Aleshin AE, Hoffman C, Firsov LM, Honzatko RB, J Mol Biol. 1994 May 13;238(4):575-91. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/8176747 8176747]
[[Category: Aspergillus awamori]]
[[Category: Aspergillus awamori]]
[[Category: Glucan 1,4-alpha-glucosidase]]
[[Category: Large Structures]]
[[Category: Single protein]]
[[Category: Aleshin AE]]
[[Category: Aleshin, A E.]]
[[Category: Firsov LM]]
[[Category: Firsov, L M.]]
[[Category: Hoffman C]]
[[Category: Hoffman, C.]]
[[Category: Honzatko RB]]
[[Category: Honzatko, R B.]]
[[Category: Hydrolase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul  1 05:29:16 2008''

Latest revision as of 14:22, 27 March 2024

REFINED CRYSTAL STRUCTURES OF GLUCOAMYLASE FROM ASPERGILLUS AWAMORI VAR. X100REFINED CRYSTAL STRUCTURES OF GLUCOAMYLASE FROM ASPERGILLUS AWAMORI VAR. X100

Structural highlights

1glm is a 1 chain structure with sequence from Aspergillus awamori. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.4Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

AMYG_ASPAW

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1glm, resolution 2.40Å

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