6j9e: Difference between revisions

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 ==Cryo-EM structure of Xanthomonos oryzae transcription elongation complex with NusA and the bacteriophage protein P7==
-<StructureSection load='6j9e' size='340' side='right'caption='[[6j9e]], [[Resolution|resolution]] 3.41&Aring;' scene=''>
+<SX load='6j9e' size='340' side='right' viewer='molstar' caption='[[6j9e]], [[Resolution|resolution]] 3.41&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[6j9e]] is a 10 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6J9E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6J9E FirstGlance]. <br>
+<table><tr><td colspan='2'>[[6j9e]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Xanthomonas_oryzae_pv._oryzae Xanthomonas oryzae pv. oryzae], [https://en.wikipedia.org/wiki/Xanthomonas_oryzae_pv._oryzae_PXO99A Xanthomonas oryzae pv. oryzae PXO99A], [https://en.wikipedia.org/wiki/Xanthomonas_virus_Xp10 Xanthomonas virus Xp10] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6J9E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6J9E FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.41&#8491;</td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA-directed_RNA_polymerase DNA-directed RNA polymerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.6 2.7.7.6] </span></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6j9e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6j9e OCA], [http://pdbe.org/6j9e PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6j9e RCSB], [http://www.ebi.ac.uk/pdbsum/6j9e PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6j9e ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6j9e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6j9e OCA], [https://pdbe.org/6j9e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6j9e RCSB], [https://www.ebi.ac.uk/pdbsum/6j9e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6j9e ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/RPOC_XANOP RPOC_XANOP]] DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. [[http://www.uniprot.org/uniprot/RPOB_XANOP RPOB_XANOP]] DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. [[http://www.uniprot.org/uniprot/RPOA_XANOP RPOA_XANOP]] DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. [[http://www.uniprot.org/uniprot/A0A0U4VN94_XANOO A0A0U4VN94_XANOO]] Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.[HAMAP-Rule:MF_00366][SAAS:SAAS00387808]
+[https://www.uniprot.org/uniprot/RPOA_XANOP RPOA_XANOP] DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
+==See Also==
+*[[RNA polymerase 3D structures|RNA polymerase 3D structures]]
 __TOC__
-</StructureSection>
+</SX>
-[[Category: DNA-directed RNA polymerase]]
 [[Category: Large Structures]]
-[[Category: You, L L]]
+[[Category: Synthetic construct]]
-[[Category: Zhang, Y]]
+[[Category: Xanthomonas oryzae pv. oryzae]]
-[[Category: Anti-termination]]
+[[Category: Xanthomonas oryzae pv. oryzae PXO99A]]
-[[Category: Nusa]]
+[[Category: Xanthomonas virus Xp10]]
-[[Category: P7]]
+[[Category: You LL]]
-[[Category: Phage]]
+[[Category: Zhang Y]]
-[[Category: Rna polymerase]]
-[[Category: Rnap clamp]]
-[[Category: Transcription]]
-[[Category: Transcription initiation]]
-[[Category: Transcription termination]]
-[[Category: Xanthomonos oryzae]]
-[[Category: Xp10]]