1dw3: Difference between revisions

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-[[Image:1dw3.png|left|200px]]
-{{STRUCTURE_1dw3|  PDB=1dw3  |  SCENE=  }}
+==STRUCTURE OF A REDUCED OXYGEN BINDING CYTOCHROME C==
+<StructureSection load='1dw3' size='340' side='right'caption='[[1dw3]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-===STRUCTURE OF A REDUCED OXYGEN BINDING CYTOCHROME C===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1dw3]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Cereibacter_sphaeroides Cereibacter sphaeroides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DW3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DW3 FirstGlance]. <br>
-{{ABSTRACT_PUBMED_10821858}}
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEC:HEME+C'>HEC</scene></td></tr>
-==About this Structure==
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dw3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dw3 OCA], [https://pdbe.org/1dw3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dw3 RCSB], [https://www.ebi.ac.uk/pdbsum/1dw3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dw3 ProSAT]</span></td></tr>
-[[1dw3]] is a 3 chain structure of [[Cytochrome c]] with sequence from [http://en.wikipedia.org/wiki/Rhodobacter_sphaeroides Rhodobacter sphaeroides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DW3 OCA].
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/SHP_CERS4 SHP_CERS4] High-spin cytochrome. Transiently bind oxygen during autoxidation, which occurs with a half-life of 3 min with a 4-fold excess of O(2). Also binds carbon monoxide, azide and cyanide.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dw/1dw3_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1dw3 ConSurf].
+<div style="clear:both"></div>
 ==See Also==
-*[[Cytochrome c|Cytochrome c]]
+*[[Cytochrome C 3D structures|Cytochrome C 3D structures]]
+__TOC__
-==Reference==
+</StructureSection>
-<ref group="xtra">PMID:010821858</ref><references group="xtra"/>
+[[Category: Cereibacter sphaeroides]]
-[[Category: Rhodobacter sphaeroides]]
+[[Category: Large Structures]]
-[[Category: Backers, K.]]
+[[Category: Backers K]]
-[[Category: Beeumen, J J.Van.]]
+[[Category: Cusanovich MA]]
-[[Category: Cusanovich, M A.]]
+[[Category: Hagen WR]]
-[[Category: Hagen, W R.]]
+[[Category: Leys D]]
-[[Category: Leys, D.]]
+[[Category: Meyer TE]]
-[[Category: Meyer, T E.]]
+[[Category: Van Beeumen JJ]]
-[[Category: Asparagine ligation]]
-[[Category: Cytochrome c]]
-[[Category: Disulfide bridge]]
-[[Category: Oxygen storage-transport complex]]
-[[Category: Reduced]]