5h2y: Difference between revisions

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New page: '''Unreleased structure''' The entry 5h2y is ON HOLD Authors: Sagong, H.-Y., Kim, K.-J. Description: Crystal strcuture of reduced DapF from Corynebacterium glutamicum [[Category: Unrel...
 
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'''Unreleased structure'''


The entry 5h2y is ON HOLD
==Crystal structure of reduced DapF from Corynebacterium glutamicum==
 
<StructureSection load='5h2y' size='340' side='right'caption='[[5h2y]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
Authors: Sagong, H.-Y., Kim, K.-J.
== Structural highlights ==
 
<table><tr><td colspan='2'>[[5h2y]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Corynebacterium_glutamicum_ATCC_13032 Corynebacterium glutamicum ATCC 13032]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5H2Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5H2Y FirstGlance]. <br>
Description: Crystal strcuture of reduced DapF from Corynebacterium glutamicum
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
[[Category: Unreleased Structures]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5h2y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5h2y OCA], [https://pdbe.org/5h2y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5h2y RCSB], [https://www.ebi.ac.uk/pdbsum/5h2y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5h2y ProSAT]</span></td></tr>
[[Category: Kim, K.-J]]
</table>
[[Category: Sagong, H.-Y]]
== Function ==
[https://www.uniprot.org/uniprot/DAPF_CORGL DAPF_CORGL] Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan. Involved in the succinylase branch of the diaminopimelate biosynthesis.<ref>PMID:12948639</ref>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Corynebacterium glutamicum ATCC 13032]]
[[Category: Large Structures]]
[[Category: Kim K-J]]
[[Category: Sagong H-Y]]

Latest revision as of 12:14, 20 March 2024

Crystal structure of reduced DapF from Corynebacterium glutamicumCrystal structure of reduced DapF from Corynebacterium glutamicum

Structural highlights

5h2y is a 2 chain structure with sequence from Corynebacterium glutamicum ATCC 13032. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

DAPF_CORGL Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan. Involved in the succinylase branch of the diaminopimelate biosynthesis.[1]

References

  1. ↑ Hartmann M, Tauch A, Eggeling L, Bathe B, Mockel B, Puhler A, Kalinowski J. Identification and characterization of the last two unknown genes, dapC and dapF, in the succinylase branch of the L-lysine biosynthesis of Corynebacterium glutamicum. J Biotechnol. 2003 Sep 4;104(1-3):199-211. PMID:12948639

5h2y, resolution 2.00Å

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