4lfu: Difference between revisions

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{{STRUCTURE_4lfu|  PDB=4lfu  |  SCENE=  }}
===Crystal structure of Escherichia coli SdiA in the space group C2===
{{ABSTRACT_PUBMED_24598739}}


==Function==
==Crystal structure of Escherichia coli SdiA in the space group C2==
[[http://www.uniprot.org/uniprot/SDIA_ECOLI SDIA_ECOLI]] Activates cell division by specifically increasing transcription from one of the two promoters that lie immediately upstream of the ftsQAZ gene cluster. Activates ydiV expression in response to extracellular autoinducer AI-1 (Vibrio fischeri autoinducer oxoC6).<ref>PMID:1915297</ref> <ref>PMID:18560382</ref>
<StructureSection load='4lfu' size='340' side='right'caption='[[4lfu]], [[Resolution|resolution]] 2.26&Aring;' scene=''>
 
== Structural highlights ==
==About this Structure==
<table><tr><td colspan='2'>[[4lfu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LFU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4LFU FirstGlance]. <br>
[[4lfu]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LFU OCA].
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.26&#8491;</td></tr>
 
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
==Reference==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4lfu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lfu OCA], [https://pdbe.org/4lfu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4lfu RCSB], [https://www.ebi.ac.uk/pdbsum/4lfu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4lfu ProSAT]</span></td></tr>
<ref group="xtra">PMID:024598739</ref><references group="xtra"/><references/>
</table>
[[Category: Choi, J.]]
== Function ==
[[Category: Duong, T.]]
[https://www.uniprot.org/uniprot/SDIA_ECOLI SDIA_ECOLI] Activates cell division by specifically increasing transcription from one of the two promoters that lie immediately upstream of the ftsQAZ gene cluster. Activates ydiV expression in response to extracellular autoinducer AI-1 (Vibrio fischeri autoinducer oxoC6).<ref>PMID:1915297</ref> <ref>PMID:18560382</ref>  
[[Category: Hwang, H Y.]]
== References ==
[[Category: Kang, S W.]]
<references/>
[[Category: Kim, K K.]]
__TOC__
[[Category: Kim, T.]]
</StructureSection>
[[Category: Lan, N.]]
[[Category: Escherichia coli K-12]]
[[Category: Lokanath, N K.]]
[[Category: Large Structures]]
[[Category: Shin, D.]]
[[Category: Choi J]]
[[Category: Wu, C A.]]
[[Category: Duong T]]
[[Category: Dna binding protein]]
[[Category: Hwang HY]]
[[Category: Luxr-type quorum sensing receptor]]
[[Category: Kang SW]]
[[Category: Transcription factor]]
[[Category: Kim KK]]
[[Category: Kim T]]
[[Category: Lan N]]
[[Category: Lokanath NK]]
[[Category: Shin D]]
[[Category: Wu CA]]

Latest revision as of 11:55, 20 March 2024

Crystal structure of Escherichia coli SdiA in the space group C2Crystal structure of Escherichia coli SdiA in the space group C2

Structural highlights

4lfu is a 1 chain structure with sequence from Escherichia coli K-12. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.26Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

SDIA_ECOLI Activates cell division by specifically increasing transcription from one of the two promoters that lie immediately upstream of the ftsQAZ gene cluster. Activates ydiV expression in response to extracellular autoinducer AI-1 (Vibrio fischeri autoinducer oxoC6).[1] [2]

References

  1. ↑ Wang XD, de Boer PA, Rothfield LI. A factor that positively regulates cell division by activating transcription of the major cluster of essential cell division genes of Escherichia coli. EMBO J. 1991 Nov;10(11):3363-72. PMID:1915297
  2. ↑ Zhou X, Meng X, Sun B. An EAL domain protein and cyclic AMP contribute to the interaction between the two quorum sensing systems in Escherichia coli. Cell Res. 2008 Sep;18(9):937-48. doi: 10.1038/cr.2008.67. PMID:18560382 doi:http://dx.doi.org/10.1038/cr.2008.67

4lfu, resolution 2.26Å

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