3vh1: Difference between revisions

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-[[Image:3vh1.png|left|200px]]
-<!--
+==Crystal structure of Saccharomyces cerevisiae Atg7 (1-595)==
-The line below this paragraph, containing "STRUCTURE_3vh1", creates the "Structure Box" on the page.
+<StructureSection load='3vh1' size='340' side='right'caption='[[3vh1]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[3vh1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VH1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VH1 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-{{STRUCTURE_3vh1|  PDB=3vh1  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vh1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vh1 OCA], [https://pdbe.org/3vh1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vh1 RCSB], [https://www.ebi.ac.uk/pdbsum/3vh1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vh1 ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/ATG7_YEAST ATG7_YEAST] E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 and ATG8 for its conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes.<ref>PMID:9759731</ref> <ref>PMID:8224160</ref> <ref>PMID:7593182</ref> <ref>PMID:10233148</ref> <ref>PMID:10233150</ref> <ref>PMID:11100732</ref> <ref>PMID:11149920</ref> <ref>PMID:12965207</ref> <ref>PMID:15277523</ref>
-===Crystal structure of Saccharomyces cerevisiae Atg7 (1-595)===
+==See Also==
+*[[Autophagy-related protein 3D structures|Autophagy-related protein 3D structures]]
+== References ==
-<!--
+<references/>
-The line below this paragraph, {{ABSTRACT_PUBMED_22055191}}, adds the Publication Abstract to the page
+__TOC__
-(as it appears on PubMed at http://www.pubmed.gov), where 22055191 is the PubMed ID number.
+</StructureSection>
--->
+[[Category: Large Structures]]
-{{ABSTRACT_PUBMED_22055191}}
+[[Category: Saccharomyces cerevisiae S288C]]
+[[Category: Inagaki F]]
-==About this Structure==
+[[Category: Noda NN]]
-[[3vh1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VH1 OCA].
+[[Category: Satoo K]]
-==Reference==
-<ref group="xtra">PMID:022055191</ref><references group="xtra"/>
-[[Category: Saccharomyces cerevisiae]]
-[[Category: Inagaki, F.]]
-[[Category: Noda, N N.]]
-[[Category: Satoo, K.]]
-[[Category: Autophagy]]
-[[Category: E1]]
-[[Category: Metal binding protein]]
-[[Category: Zinc binding]]