3td3: Difference between revisions

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-'''Unreleased structure'''
-The entry 3td3 is ON HOLD
+==Crystal structure of OmpA-like domain from Acinetobacter baumannii in complex with glycine==
+<StructureSection load='3td3' size='340' side='right'caption='[[3td3]], [[Resolution|resolution]] 1.59&Aring;' scene=''>
-Authors: Park, J.S., Lee, W.C., Song, J.H., Kim, H.Y.
+== Structural highlights ==
+<table><tr><td colspan='2'>[[3td3]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Acinetobacter_baumannii Acinetobacter baumannii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TD3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3TD3 FirstGlance]. <br>
-Description: Mechanism of Anchoring of the Cell Wall Peptidoglycan to OmpA Protein of the Gram-Negative Bacterial Outer Membrane
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.59&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GLY:GLYCINE'>GLY</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3td3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3td3 OCA], [https://pdbe.org/3td3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3td3 RCSB], [https://www.ebi.ac.uk/pdbsum/3td3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3td3 ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/OMP38_ACIB2 OMP38_ACIB2] Functions as a porin (PubMed:9928952). Induces apoptosis in human cell lines through caspase-dependent and AIF-dependent pathways. Purified Omp38 enters host cell and localizes to the mitochondria, which presumably leads to a release of proapoptotic molecules such as cytochrome c and AIF (apoptosis-inducing factor) (PubMed:16008580). Binds peptidoglycan, contributes to cell wall maintenance (Probable).<ref>PMID:16008580</ref> <ref>PMID:9928952</ref> <ref>PMID:16008580</ref> <ref>PMID:21965596</ref>
+== References ==
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Acinetobacter baumannii]]
+[[Category: Large Structures]]
+[[Category: Kim HY]]
+[[Category: Lee WC]]
+[[Category: Park JS]]
+[[Category: Song JH]]