3rnv: Difference between revisions

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-[[Image:3rnv.jpg|left|200px]]
-<!--
+==Structure of the autocatalytic cysteine protease domain of potyvirus helper-component proteinase==
-The line below this paragraph, containing "STRUCTURE_3rnv", creates the "Structure Box" on the page.
+<StructureSection load='3rnv' size='340' side='right'caption='[[3rnv]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[3rnv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Turnip_mosaic_virus Turnip mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RNV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3RNV FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
--->
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3rnv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rnv OCA], [https://pdbe.org/3rnv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3rnv RCSB], [https://www.ebi.ac.uk/pdbsum/3rnv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3rnv ProSAT]</span></td></tr>
-{{STRUCTURE_3rnv|  PDB=3rnv  |  SCENE=  }}
+</table>
+== Function ==
-===Structure of the autocatalytic cysteine protease domain of potyvirus helper-component proteinase===
+[https://www.uniprot.org/uniprot/POLG_TUMVJ POLG_TUMVJ] Capsid protein: involved in aphid transmission, cell-to-cell and systemis movement, encapsidation of the viral RNA and in the regulation of viral RNA amplification.  Nuclear inclusion protein B: a RNA-dependent RNA polymerase that plays an essential role in the virus replication.  Helper component proteinase: required for aphid transmission and also has proteolytic activity. Only cleaves a Gly-Gly dipeptide at its own C-terminus. Interacts with virions and aphid stylets. Acts as a suppressor of RNA-mediated gene silencing, also known as post-transcriptional gene silencing (PTGS), a mechanism of plant viral defense that limits the accumulation of viral RNAs. May have RNA-binding activity (By similarity).  Cytoplasmic inclusion protein: has helicase activity. It may be involved in replication (By similarity).  Both 6K peptides are indispensable for virus replication (By similarity).  Nuclear inclusion protein A: has RNA-binding and proteolytic activities.
+__TOC__
+</StructureSection>
-==About this Structure==
+[[Category: Large Structures]]
-[[3rnv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Turnip_mosaic_virus Turnip mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RNV OCA].
-[[Category: Helper-component proteinase]]
 [[Category: Turnip mosaic virus]]
-[[Category: Ye, K.]]
+[[Category: Ye K]]

3rnv: Difference between revisions

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