3qhq: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:


==Structure of CRISPR-associated protein Csn2==
==Structure of CRISPR-associated protein Csn2==
<StructureSection load='3qhq' size='340' side='right' caption='[[3qhq]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='3qhq' size='340' side='right'caption='[[3qhq]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3qhq]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptococcus_agalactiae_atcc_13813 Streptococcus agalactiae atcc 13813]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QHQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3QHQ FirstGlance]. <br>
<table><tr><td colspan='2'>[[3qhq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_agalactiae_ATCC_13813 Streptococcus agalactiae ATCC 13813]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QHQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3QHQ FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">HMPREF9171_1216 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=888745 Streptococcus agalactiae ATCC 13813])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA-directed_RNA_polymerase DNA-directed RNA polymerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.6 2.7.7.6] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3qhq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qhq OCA], [https://pdbe.org/3qhq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3qhq RCSB], [https://www.ebi.ac.uk/pdbsum/3qhq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3qhq ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3qhq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qhq OCA], [http://pdbe.org/3qhq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3qhq RCSB], [http://www.ebi.ac.uk/pdbsum/3qhq PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3qhq ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/CSN2_STRAG CSN2_STRAG]] CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA) (By similarity). Binds dsDNA, binding is disrupted by EGTA.  
[https://www.uniprot.org/uniprot/CSN2_STRA8 CSN2_STRA8] CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA) (By similarity). Binds dsDNA, binding is disrupted by EGTA.


==See Also==
==See Also==
*[[Endonuclease|Endonuclease]]
*[[Endonuclease 3D structures|Endonuclease 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: DNA-directed RNA polymerase]]
[[Category: Large Structures]]
[[Category: Streptococcus agalactiae atcc 13813]]
[[Category: Streptococcus agalactiae ATCC 13813]]
[[Category: Arslan, Z]]
[[Category: Arslan Z]]
[[Category: Ellinger, P]]
[[Category: Ellinger P]]
[[Category: Pfeffer, K]]
[[Category: Pfeffer K]]
[[Category: Pul, U]]
[[Category: Pul U]]
[[Category: Schmitt, L]]
[[Category: Schmitt L]]
[[Category: Smits, S H]]
[[Category: Smits SH]]
[[Category: Tschapek, B]]
[[Category: Tschapek B]]
[[Category: Wagner, R]]
[[Category: Wagner R]]
[[Category: Wurm, R]]
[[Category: Wurm R]]
[[Category: Helicase]]
[[Category: Transferase]]

Latest revision as of 11:35, 20 March 2024

Structure of CRISPR-associated protein Csn2Structure of CRISPR-associated protein Csn2

Structural highlights

3qhq is a 2 chain structure with sequence from Streptococcus agalactiae ATCC 13813. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

CSN2_STRA8 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA) (By similarity). Binds dsDNA, binding is disrupted by EGTA.

See Also

3qhq, resolution 2.00Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA