3ggq: Difference between revisions

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-[[Image:3ggq.png|left|200px]]
-{{STRUCTURE_3ggq|  PDB=3ggq  |  SCENE=  }}
+==Dimerization of Hepatitis E Virus Capsid Protein E2s Domain is Essential for Virus-Host Interaction==
+<StructureSection load='3ggq' size='340' side='right'caption='[[3ggq]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-===Dimerization of Hepatitis E Virus Capsid Protein E2s Domain is Essential for Virus-Host Interaction===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[3ggq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Hepatitis_E_virus_(strain_Pakistan) Hepatitis E virus (strain Pakistan)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GGQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GGQ FirstGlance]. <br>
-{{ABSTRACT_PUBMED_19662165}}
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BR:BROMIDE+ION'>BR</scene></td></tr>
-==About this Structure==
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ggq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ggq OCA], [https://pdbe.org/3ggq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ggq RCSB], [https://www.ebi.ac.uk/pdbsum/3ggq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ggq ProSAT]</span></td></tr>
-[[3ggq]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Hepatitis_e_virus_(strain_pakistan) Hepatitis e virus (strain pakistan)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GGQ OCA].
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/CAPSD_HEVPA CAPSD_HEVPA] Major viral capsid protein that encapsidates the viral genome. Binds to the 5' end of the genomic RNA (By similarity).
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gg/3ggq_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ggq ConSurf].
+<div style="clear:both"></div>
 ==See Also==
-*[[Virus coat protein|Virus coat protein]]
+*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
+__TOC__
-==Reference==
+</StructureSection>
-<ref group="xtra">PMID:019662165</ref><references group="xtra"/>
+[[Category: Large Structures]]
-[[Category: Du, H L.]]
+[[Category: Du HL]]
-[[Category: Gu, Y.]]
+[[Category: Gu Y]]
-[[Category: Hew, C L.]]
+[[Category: Hew CL]]
-[[Category: Li, S W.]]
+[[Category: Li SW]]
-[[Category: Seetharaman, J.]]
+[[Category: Seetharaman J]]
-[[Category: Shih, J W.K.]]
+[[Category: Shih JWK]]
-[[Category: Sivaraman, J.]]
+[[Category: Sivaraman J]]
-[[Category: Tang, X H.]]
+[[Category: Tang XH]]
-[[Category: Xia, N S.]]
+[[Category: Xia NS]]
-[[Category: Yang, C Y.]]
+[[Category: Yang CY]]
-[[Category: Zhang, J.]]
+[[Category: Zhang J]]
-[[Category: Beta barrel]]
-[[Category: Capsid protein]]
-[[Category: Rna-binding]]
-[[Category: Viral protein]]