3ek6: Difference between revisions

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-{{Seed}}
-[[Image:3ek6.png|left|200px]]
-<!--
+==Unique GTP-binding Pocket and Allostery of UMP Kinase from a Gram-Negative Phytopathogen Bacterium==
-The line below this paragraph, containing "STRUCTURE_3ek6", creates the "Structure Box" on the page.
+<StructureSection load='3ek6' size='340' side='right'caption='[[3ek6]], [[Resolution|resolution]] 2.34&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[3ek6]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Xanthomonas_campestris_pv._campestris Xanthomonas campestris pv. campestris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EK6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EK6 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.34&#8491;</td></tr>
--->
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ek6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ek6 OCA], [https://pdbe.org/3ek6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ek6 RCSB], [https://www.ebi.ac.uk/pdbsum/3ek6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ek6 ProSAT]</span></td></tr>
-{{STRUCTURE_3ek6|  PDB=3ek6  |  SCENE=  }}
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/PYRH_XANCP PYRH_XANCP] Catalyzes the reversible phosphorylation of UMP to UDP (By similarity).
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ek/3ek6_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ek6 ConSurf].
+<div style="clear:both"></div>
-===Unique GTP-binding Pocket and Allostery of UMP Kinase from a Gram-Negative Phytopathogen Bacterium===
+==See Also==
+*[[Uridylate kinase|Uridylate kinase]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_19059268}}, adds the Publication Abstract to the page
+[[Category: Large Structures]]
-(as it appears on PubMed at http://www.pubmed.gov), where 19059268 is the PubMed ID number.
--->
-{{ABSTRACT_PUBMED_19059268}}
-==About this Structure==
-EK6 is a 6 chains structure of sequences from [http://en.wikipedia.org/wiki/Xanthomonas_campestris_pv._campestris Xanthomonas campestris pv. campestris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EK6 OCA].
-==Reference==
-<ref group="xtra">PMID:19059268</ref><references group="xtra"/>
-[[Category: UMP kinase]]
 [[Category: Xanthomonas campestris pv. campestris]]
-[[Category: Chin, K H.]]
+[[Category: Chin K-H]]
-[[Category: Chou, S H.]]
+[[Category: Chou S-H]]
-[[Category: Tu, J L.]]
+[[Category: Tu J-L]]
-[[Category: Wang, A H.J.]]
+[[Category: Wang AH-J]]
-[[Category: Allosteric regulation]]
-[[Category: Atp-binding]]
-[[Category: Cytoplasm]]
-[[Category: Kinase]]
-[[Category: Nucleotide-binding]]
-[[Category: Pyrimidine biosynthesis]]
-[[Category: Transferase]]
-[[Category: Umpk crystal structure]]
-[[Category: Unique gtp binding site]]
-[[Category: Xanthomonas campestri]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 28 08:46:17 2009''