3e2d: Difference between revisions

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[[Image:3e2d.jpg|left|200px]]


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==The 1.4 A crystal structure of the large and cold-active Vibrio sp. alkaline phosphatase==
The line below this paragraph, containing "STRUCTURE_3e2d", creates the "Structure Box" on the page.
<StructureSection load='3e2d' size='340' side='right'caption='[[3e2d]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3e2d]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_sp._G15-21 Vibrio sp. G15-21]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E2D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3E2D FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_3e2d| PDB=3e2d |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3e2d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e2d OCA], [https://pdbe.org/3e2d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3e2d RCSB], [https://www.ebi.ac.uk/pdbsum/3e2d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3e2d ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q93P54_9VIBR Q93P54_9VIBR]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e2/3e2d_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3e2d ConSurf].
<div style="clear:both"></div>


===The 1.4 A crystal structure of the large and cold-active Vibrio sp. alkaline phosphatase===
==See Also==
 
*[[Alkaline phosphatase 3D structures|Alkaline phosphatase 3D structures]]
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_18977465}}, adds the Publication Abstract to the page
[[Category: Large Structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 18977465 is the PubMed ID number.
[[Category: Vibrio sp. G15-21]]
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[[Category: Asgeirsson B]]
{{ABSTRACT_PUBMED_18977465}}
[[Category: Helland R]]
 
[[Category: Larsen RL]]
==About this Structure==
3E2D is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Bacteria Bacteria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E2D OCA].
 
==Reference==
<ref group="xtra">PMID:18977465</ref><references group="xtra"/>
[[Category: Alkaline phosphatase]]
[[Category: Bacteria]]
[[Category: Asgeirsson, B.]]
[[Category: Helland, R.]]
[[Category: Larsen, R L.]]
[[Category: Cold-adaptation]]
[[Category: Crystallography]]
[[Category: Dimer]]
[[Category: Hydrolase]]
[[Category: Metalloenzyme]]
[[Category: Psychrophilic bacteria]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 17 10:27:40 2009''

Latest revision as of 11:24, 20 March 2024

The 1.4 A crystal structure of the large and cold-active Vibrio sp. alkaline phosphataseThe 1.4 A crystal structure of the large and cold-active Vibrio sp. alkaline phosphatase

Structural highlights

3e2d is a 2 chain structure with sequence from Vibrio sp. G15-21. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.4Å
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q93P54_9VIBR

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3e2d, resolution 1.40Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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