3doi: Difference between revisions

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-{{Seed}}
-[[Image:3doi.jpg|left|200px]]
-<!--
+==Crystal Structure of a Thermostable Esterase complex with paraoxon==
-The line below this paragraph, containing "STRUCTURE_3doi", creates the "Structure Box" on the page.
+<StructureSection load='3doi' size='340' side='right'caption='[[3doi]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[3doi]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DOI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DOI FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DEP:DIETHYL+PHOSPHONATE'>DEP</scene></td></tr>
-{{STRUCTURE_3doi|  PDB=3doi  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3doi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3doi OCA], [https://pdbe.org/3doi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3doi RCSB], [https://www.ebi.ac.uk/pdbsum/3doi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3doi ProSAT]</span></td></tr>
+</table>
-===Crystal Structure of a Thermostable Esterase complex with paraoxon===
+== Function ==
+[https://www.uniprot.org/uniprot/Q9WXP0_THEMA Q9WXP0_THEMA]
+== Evolutionary Conservation ==
-<!--
+[[Image:Consurf_key_small.gif|200px|right]]
-The line below this paragraph, {{ABSTRACT_PUBMED_19013466}}, adds the Publication Abstract to the page
+Check<jmol>
-(as it appears on PubMed at http://www.pubmed.gov), where 19013466 is the PubMed ID number.
+  <jmolCheckbox>
--->
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/do/3doi_consurf.spt"</scriptWhenChecked>
-{{ABSTRACT_PUBMED_19013466}}
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
-==About this Structure==
+  </jmolCheckbox>
-DOI is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DOI OCA].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3doi ConSurf].
+<div style="clear:both"></div>
-==Reference==
+__TOC__
-<ref group="xtra">PMID:19013466</ref><references group="xtra"/>
+</StructureSection>
-[[Category: Carboxylesterase]]
+[[Category: Large Structures]]
 [[Category: Thermotoga maritima]]
-[[Category: Dijkstra, B W.]]
+[[Category: Dijkstra BW]]
-[[Category: Hendriks, S.]]
+[[Category: Hendriks S]]
-[[Category: Kengen, S W.M.]]
+[[Category: Kengen SWM]]
-[[Category: Levisson, M.]]
+[[Category: Levisson M]]
-[[Category: Oost, J Van der.]]
+[[Category: Sun L]]
-[[Category: Sun, L.]]
+[[Category: Van der Oost J]]
-[[Category: Alpha-beta hydrolase]]
-[[Category: Beta sheet]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 09:04:17 2009''