UvrABC: Difference between revisions

Michal Harel (talk | contribs)
No edit summary
Michal Harel (talk | contribs)
No edit summary
 
(6 intermediate revisions by 2 users not shown)
Line 1: Line 1:
<StructureSection load='3pih' size='3
<StructureSection load='3pih' size='340' side='right' caption='UvrA complex with DNA, pyrophosphate and Zn+2 ion (grey) [[3pih]]' scene='53/536710/Cv/3' >
50' side='right' caption='UvrA complex with DNA, pyrophosphate and Zn+2 ion (grey) [[3pih]]' scene='' >
== Function ==
== Function ==
'''UvrABC''' endonuclease is an ''E. coli'' enzyme complex involved in DNA repair.  UvrABC removes 12 nucleotides around a DNA mutation replacing them with the correct one<ref>PMID:11004168</ref>.<br />
'''UvrABC''' endonuclease is an ''E. coli'' enzyme complex involved in DNA repair.  UvrABC removes 12 nucleotides around a DNA mutation replacing them with the correct one<ref>PMID:11004168</ref>.<br />
Line 11: Line 10:


== Structural highlights ==
== Structural highlights ==
UvrA contains several domains: <scene name='53/536710/Cv/1'>UvrB-binding, DNA-binding and two ATP-binding domains</scene><ref>PMID:21240268</ref>.
UvrA contains several domains: <scene name='53/536710/Cv/2'>UvrB-binding, DNA-binding and two ATP-binding domains</scene><ref>PMID:21240268</ref>.
</StructureSection>
 
==3D structures of UvrABC==
==3D structures of UvrABC==


Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
[[UvrABC 3D structures]]
{{#tree:id=OrganizedByTopic|openlevels=0|
 
*UvrA
 
**[[3pih]] – TmUvrA + DNA – ''Thermotoga maritima'' <br />
**[[3zqj]] – UvrA  – ''Mycobacterium tuberculosis''<br />
**[[4dfc]] – EcUvrA + Transcription-repair-coupling factor – ''Escherichia coli'' <br />
**[[2r6f]] – BstUvrA – ''Bacillus stearothermophilus'' <br />
**[[3ux8]] – GeUvrA - ''Geobacillus''<br />
**[[2vf7]], [[2vf8]] – DrUvrA2 - ''Deinococcus radiodurans''<br />


*UvrB
**[[1d2m]], [[1c4o]] – UvrB – ''Thermus thermophilus'' <br />
**[[1d9x]] – BcUvrB – ''Bacillus caldotenax'' <br />
**[[1t5l]] – BcUvrB (mutant) <br />
**[[1qoj]] – EcUvrB C terminal <br />
**[[1e52]] – EcUvrB C terminal - NMR<br />
**[[1d9z]] – BcUvrB + ATP <br />
**[[2fdc]] – BcUvrB + DNA <br />
**[[2d7d]], [[2nmv]], [[3v4r]] – BsUvrB + DNA – ''Bacillus subtilis'' <br />
*UvrC
**[[1kft]], [[1qoj]] – EcUvrC C terminal <br />
**[[1e52]] – EcUvrC C terminal - NMR<br />
**[[2nrr]], [[2nrt]], [[2nrv]], [[2nrw]], [[2nrx]], [[2nrz]] – TmUvrC C terminal <br />
**[[1ycz]], [[1yd0]], [[1yd1]] – TmUvrC N terminal <br />
**[[1yd2]], [[1yd3]], [[1yd4]], [[1yd5]] – TmUvrC N terminal (mutant)<br />
**[[1yd6]] – BcUvrC N terminal <br />
**[[3c65]] – BstUvrC  <br />
*UvrD or DNA helicase II see [[Helicase]]
*UvrA-UvrB
**[[3fpn]] – BstUvrA + UvrB <br />
**[[3uwx]] – GeUvrA + UvrB <br />
}}
==References==
==References==
<references />
<references />
</StructureSection>
[[Category:Topic Page]]
[[Category:Topic Page]]

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky