UvrABC: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky

@@ Line 1: / Line 1: @@
-<StructureSection load='3pih' size='450' side='right' caption='UvrA complex with DNA, pyrophosphate and Zn+2 ion (grey) [[3pih]]' scene='' >
+<StructureSection load='3pih' size='340' side='right' caption='UvrA complex with DNA, pyrophosphate and Zn+2 ion (grey) [[3pih]]' scene='53/536710/Cv/3' >
 == Function ==
 '''UvrABC''' endonuclease is an ''E. coli'' enzyme complex involved in DNA repair.  UvrABC removes 12 nucleotides around a DNA mutation replacing them with the correct one<ref>PMID:11004168</ref>.<br />
-*  '''UvrA''' is the protein which locates the DNA damage.<br />
+*  '''UvrA''' is the protein which locates the DNA damage<ref>PMID:21240268</ref>.<br />
 *  '''UvrB''' is involved in distinguishing damaged from undamaged DNA<ref>PMID:10946234</ref>.<br />
 *  The C-terminal region of '''UvrC''' is involved in DNA binding and incisions at the 5'-side of a DNA damage during nucleotide excision repair<ref>PMID:9421501</ref>.
@@ Line 10: / Line 10: @@
 == Structural highlights ==
-UvrA contains several domains: <scene name='53/536710/Cv/1'>UvrB-binding, DNA-binding and two ATP-binding domains</scene><ref>PMID:21240268</ref>.
+UvrA contains several domains: <scene name='53/536710/Cv/2'>UvrB-binding, DNA-binding and two ATP-binding domains</scene><ref>PMID:21240268</ref>.
-</StructureSection>
 ==3D structures of UvrABC==
-Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
+[[UvrABC 3D structures]]
-{{#tree:id=OrganizedByTopic|openlevels=0|
-*UvrA
-**[[3pih]] – TmUvrA + DNA – ''Thermotoga maritima'' <br />
-**[[3zqj]] – UvrA  – ''Mycobacterium tuberculosis''<br />
-**[[4dfc]] – EcUvrA + Transcription-repair-coupling factor – ''Escherichia coli'' <br />
-**[[2r6f]] – BstUvrA – ''Bacillus stearothermophilus'' <br />
-**[[3ux8]] – GeUvrA - ''Geobacillus''<br />
-**[[2vf7]], [[2vf8]] – DrUvrA2 - ''Deinococcus radiodurans''<br />
-*UvrB
-**[[1d2m]], [[1c4o]] – UvrB – ''Thermus thermophilus'' <br />
-**[[1d9x]] – BcUvrB – ''Bacillus caldotenax'' <br />
-**[[1t5l]] – BcUvrB (mutant) <br />
-**[[1qoj]] – EcUvrB C terminal <br />
-**[[1e52]] – EcUvrB C terminal - NMR<br />
-**[[1d9z]] – BcUvrB + ATP <br />
-**[[2fdc]] – BcUvrB + DNA <br />
-**[[2d7d]], [[2nmv]], [[3v4r]] – BsUvrB + DNA – ''Bacillus subtilis'' <br />
-*UvrC
-**[[1kft]], [[1qoj]] – EcUvrC C terminal <br />
-**[[1e52]] – EcUvrC C terminal - NMR<br />
-**[[2nrr]], [[2nrt]], [[2nrv]], [[2nrw]], [[2nrx]], [[2nrz]] – TmUvrC C terminal <br />
-**[[1ycz]], [[1yd0]], [[1yd1]] – TmUvrC N terminal <br />
-**[[1yd2]], [[1yd3]], [[1yd4]], [[1yd5]] – TmUvrC N terminal (mutant)<br />
-**[[1yd6]] – BcUvrC N terminal <br />
-**[[3c65]] – BstUvrC  <br />
-*UvrD or DNA helicase II
-**[[3lfu]] – EcUvrD <br />
-**[[2is1]], [[2is2]] – EcUvrD (mutant) + DNA<br />
-**[[2is4]] – EcUvrD (mutant) + DNA + ADPNP<br />
-**[[2is6]] – EcUvrD (mutant) + DNA + ADP<br />
-**[[4c2u]] – DrUvrD + DNA<br />
-**[[4c30]] – DrUvrD + DNA + ADPNP<br />
-**[[4c2t]] – DrUvrD (mutant) + DNA + ADPNP<br />
-*UvrA-UvrB
-**[[3fpn]] – BstUvrA + UvrB <br />
-**[[3uwx]] – GeUvrA + UvrB <br />
-}}
 ==References==
 <references />
+</StructureSection>
 [[Category:Topic Page]]