4fnh: Difference between revisions

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[[Image:4fnh.png|left|200px]]


{{STRUCTURE_4fnh|  PDB=4fnh  |  SCENE=  }}
==Crystal structure of IsdI-W66Y in complex with heme==
 
<StructureSection load='4fnh' size='340' side='right'caption='[[4fnh]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
===Crystal structure of IsdI-W66Y in complex with heme===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[4fnh]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_N315 Staphylococcus aureus subsp. aureus N315]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4FNH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4FNH FirstGlance]. <br>
{{ABSTRACT_PUBMED_22891243}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
 
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4fnh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4fnh OCA], [https://pdbe.org/4fnh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4fnh RCSB], [https://www.ebi.ac.uk/pdbsum/4fnh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4fnh ProSAT]</span></td></tr>
[[4fnh]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_n315 Staphylococcus aureus subsp. aureus n315]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4FNH OCA].  
</table>
== Function ==
[https://www.uniprot.org/uniprot/HDOX2_STAAN HDOX2_STAAN] Allows bacterial pathogens to use the host heme as an iron source. Catalyzes the oxidative degradation of the heme macrocyclic porphyrin ring to the oxo-bilirubin chromophore staphylobilin (a mixture of the linear tetrapyrroles 5-oxo-delta-bilirubin and 15-oxo-beta-bilirubin) in the presence of a suitable electron donor such as ascorbate or NADPH--cytochrome P450 reductase, with subsequent release of free iron.[HAMAP-Rule:MF_01272]<ref>PMID:18713745</ref> <ref>PMID:20180905</ref>


==See Also==
==See Also==
*[[Heme oxygenase|Heme oxygenase]]
*[[Heme oxygenase 3D structures|Heme oxygenase 3D structures]]
[[Category: Heme oxygenase]]
*[[Monooxygenase 3D structures|Monooxygenase 3D structures]]
[[Category: Staphylococcus aureus subsp. aureus n315]]
== References ==
[[Category: Murphy, M E.P.]]
<references/>
[[Category: Ukpabi, G N.]]
__TOC__
[[Category: Alpha/beta barrel]]
</StructureSection>
[[Category: Oxidoreductase]]
[[Category: Large Structures]]
[[Category: Staphylococcus aureus subsp. aureus N315]]
[[Category: Murphy MEP]]
[[Category: Ukpabi GN]]

Latest revision as of 18:30, 14 March 2024

Crystal structure of IsdI-W66Y in complex with hemeCrystal structure of IsdI-W66Y in complex with heme

Structural highlights

4fnh is a 2 chain structure with sequence from Staphylococcus aureus subsp. aureus N315. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.9Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

HDOX2_STAAN Allows bacterial pathogens to use the host heme as an iron source. Catalyzes the oxidative degradation of the heme macrocyclic porphyrin ring to the oxo-bilirubin chromophore staphylobilin (a mixture of the linear tetrapyrroles 5-oxo-delta-bilirubin and 15-oxo-beta-bilirubin) in the presence of a suitable electron donor such as ascorbate or NADPH--cytochrome P450 reductase, with subsequent release of free iron.[HAMAP-Rule:MF_01272][1] [2]

See Also

References

  1. Lee WC, Reniere ML, Skaar EP, Murphy ME. Ruffling of metalloporphyrins bound to IsdG and IsdI, two heme-degrading enzymes in Staphylococcus aureus. J Biol Chem. 2008 Nov 7;283(45):30957-63. Epub 2008 Aug 19. PMID:18713745 doi:10.1074/jbc.M709486200
  2. Reniere ML, Ukpabi GN, Harry SR, Stec DF, Krull R, Wright DW, Bachmann BO, Murphy ME, Skaar EP. The IsdG-family of haem oxygenases degrades haem to a novel chromophore. Mol Microbiol. 2010 Mar;75(6):1529-38. Epub 2010 Feb 17. PMID:20180905 doi:10.1111/j.1365-2958.2010.07076.x

4fnh, resolution 1.90Å

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