4dfs: Difference between revisions

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 ==Structure of the catalytic domain of an endo-1,3-beta-glucanase (laminarinase) from Thermotoga petrophila RKU-1==
-<StructureSection load='4dfs' size='340' side='right' caption='[[4dfs]], [[Resolution|resolution]] 3.75&Aring;' scene=''>
+<StructureSection load='4dfs' size='340' side='right'caption='[[4dfs]], [[Resolution|resolution]] 3.75&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4dfs]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thep1 Thep1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DFS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DFS FirstGlance]. <br>
+<table><tr><td colspan='2'>[[4dfs]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_petrophila_RKU-1 Thermotoga petrophila RKU-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DFS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DFS FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.754&#8491;</td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Tpet_0899 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=390874 THEP1])</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dfs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dfs OCA], [http://pdbe.org/4dfs PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4dfs RCSB], [http://www.ebi.ac.uk/pdbsum/4dfs PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4dfs ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dfs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dfs OCA], [https://pdbe.org/4dfs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dfs RCSB], [https://www.ebi.ac.uk/pdbsum/4dfs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dfs ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/A5IL44_THEP1 A5IL44_THEP1]
 ==See Also==
-*[[Glucanase|Glucanase]]
+*[[Glucanase 3D structures|Glucanase 3D structures]]
+*[[Laminarase 3D structures|Laminarase 3D structures]]
 __TOC__
 </StructureSection>
-[[Category: Thep1]]
+[[Category: Large Structures]]
-[[Category: Meza, A N]]
+[[Category: Thermotoga petrophila RKU-1]]
-[[Category: Murakami, M T]]
+[[Category: Meza AN]]
-[[Category: Prade, R A]]
+[[Category: Murakami MT]]
-[[Category: Ruller, R]]
+[[Category: Prade RA]]
-[[Category: Santos, C R]]
+[[Category: Ruller R]]
-[[Category: Squina, F M]]
+[[Category: Santos CR]]
-[[Category: Beta-jelly roll]]
+[[Category: Squina FM]]
-[[Category: Gh16]]
-[[Category: Glycosyl hydrolase family 16]]
-[[Category: Hydrolase]]
-[[Category: Laminarinase]]
-[[Category: Secreted]]
-[[Category: Sugar]]
-[[Category: Thermotoga petrophila rku-1]]