4dcy: Difference between revisions

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-[[Image:4dcy.jpg|left|200px]]
-<!--
+==X-ray structure of NikA in complex with Fe(1S,2S)-N,N-kappa-Bis(2-pyridylmethyl)-N-carboxymethyl-N-kappa-methyl-1,2-cyclohexanediamine==
-The line below this paragraph, containing "STRUCTURE_4dcy", creates the "Structure Box" on the page.
+<StructureSection load='4dcy' size='340' side='right'caption='[[4dcy]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[4dcy]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DCY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DCY FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=L2M:{(R)-N-[(1S,2S)-2-{METHYL[(PYRIDIN-2-YL-KAPPAN)METHYL]AMINO-KAPPAN}CYCLOHEXYL]-N-[(PYRIDIN-2-YL-KAPPAN)METHYL]GLYCINATO-KAPPA~2~N,O}IRON(2+)'>L2M</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr>
-{{STRUCTURE_4dcy|  PDB=4dcy  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dcy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dcy OCA], [https://pdbe.org/4dcy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dcy RCSB], [https://www.ebi.ac.uk/pdbsum/4dcy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dcy ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/NIKA_ECOLI NIKA_ECOLI] Involved in a nickel transport system, probably represents the nickel binder.
-===X-ray structure of NikA in complex with Fe(1S,2S)-N,N-kappa-Bis(2-pyridylmethyl)-N-carboxymethyl-N-kappa-methyl-1,2-cyclohexanediamine===
+==See Also==
+*[[ABC transporter 3D structures|ABC transporter 3D structures]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_22526565}}, adds the Publication Abstract to the page
+[[Category: Escherichia coli K-12]]
-(as it appears on PubMed at http://www.pubmed.gov), where 22526565 is the PubMed ID number.
+[[Category: Large Structures]]
--->
+[[Category: Amara P]]
-{{ABSTRACT_PUBMED_22526565}}
+[[Category: Cavazza C]]
+[[Category: Cherrier MV]]
-==About this Structure==
+[[Category: Fontecilla-Camps JC]]
-[[4dcy]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DCY OCA].
+[[Category: Girgenti E]]
+[[Category: Iannello M]]
-==Reference==
+[[Category: Marchi-Delapierre C]]
-<ref group="xtra">PMID:022526565</ref><references group="xtra"/>
+[[Category: Menage S]]
-[[Category: Escherichia coli]]
-[[Category: Amara, P.]]
-[[Category: Cavazza, C.]]
-[[Category: Cherrier, M V.]]
-[[Category: Fontecilla-Camps, J C.]]
-[[Category: Girgenti, E.]]
-[[Category: Iannello, M.]]
-[[Category: Marchi-Delapierre, C.]]
-[[Category: Menage, S.]]
-[[Category: Metal transport]]
-[[Category: Protein-bound iron complex]]
-[[Category: Transport protein]]