4blc: Difference between revisions

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-{{Seed}}
-[[Image:4blc.png|left|200px]]
-<!--
+==THE STRUCTURE OF ORTHORHOMBIC CRYSTALS OF BEEF LIVER CATALASE==
-The line below this paragraph, containing "STRUCTURE_4blc", creates the "Structure Box" on the page.
+<StructureSection load='4blc' size='340' side='right'caption='[[4blc]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[4blc]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BLC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4BLC FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=NDP:NADPH+DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NDP</scene></td></tr>
-{{STRUCTURE_4blc|  PDB=4blc  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4blc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4blc OCA], [https://pdbe.org/4blc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4blc RCSB], [https://www.ebi.ac.uk/pdbsum/4blc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4blc ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/CATA_BOVIN CATA_BOVIN] Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. Promotes growth of cells.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bl/4blc_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=4blc ConSurf].
+<div style="clear:both"></div>
-===THE STRUCTURE OF ORTHORHOMBIC CRYSTALS OF BEEF LIVER CATALASE===
+==See Also==
+*[[Catalase 3D structures|Catalase 3D structures]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_10417406}}, adds the Publication Abstract to the page
-(as it appears on PubMed at http://www.pubmed.gov), where 10417406 is the PubMed ID number.
--->
-{{ABSTRACT_PUBMED_10417406}}
-==About this Structure==
-BLC is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BLC OCA].
-==Reference==
-Structure of orthorhombic crystals of beef liver catalase., Ko TP, Day J, Malkin AJ, McPherson A, Acta Crystallogr D Biol Crystallogr. 1999 Aug;55(Pt 8):1383-94. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10417406 10417406]
 [[Category: Bos taurus]]
-[[Category: Catalase]]
+[[Category: Large Structures]]
-[[Category: Single protein]]
+[[Category: Day J]]
-[[Category: Day, J.]]
+[[Category: Ko TP]]
-[[Category: Ko, T P.]]
+[[Category: Malkin A]]
-[[Category: Malkin, A.]]
+[[Category: McPherson A]]
-[[Category: McPherson, A.]]
-[[Category: Heme protein]]
-[[Category: Lattice contact]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Jul  3 13:29:58 2008''