3vdh: Difference between revisions

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[[Image:3vdh.jpg|left|200px]]


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==Crystal structure of PbGH5A, a glycoside hydrolase family 5 enzyme from Prevotella bryantii B14==
The line below this paragraph, containing "STRUCTURE_3vdh", creates the "Structure Box" on the page.
<StructureSection load='3vdh' size='340' side='right'caption='[[3vdh]], [[Resolution|resolution]] 1.62&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3vdh]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Prevotella_bryantii Prevotella bryantii]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3l55 3l55]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VDH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VDH FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.62&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3vdh|  PDB=3vdh  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vdh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vdh OCA], [https://pdbe.org/3vdh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vdh RCSB], [https://www.ebi.ac.uk/pdbsum/3vdh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vdh ProSAT]</span></td></tr>
 
</table>
===Crystal structure of a putative beta-1,4-endoglucanase / cellulase from Prevotella bryantii===
== Function ==
 
[https://www.uniprot.org/uniprot/O06842_PREBR O06842_PREBR]
 
__TOC__
==About this Structure==
</StructureSection>
[[3vdh]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Prevotella_bryantii Prevotella bryantii]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3l55 3l55]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VDH OCA].  
[[Category: Large Structures]]
[[Category: Prevotella bryantii]]
[[Category: Prevotella bryantii]]
[[Category: Edwards, A M.]]
[[Category: Edwards AM]]
[[Category: Egorova, O.]]
[[Category: Egorova O]]
[[Category: Evdokimova, E.]]
[[Category: Evdokimova E]]
[[Category: Joachimiak, A.]]
[[Category: Joachimiak A]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Savchenko A]]
[[Category: Savchenko, A.]]
[[Category: Stogios PJ]]
[[Category: Stogios, P J.]]
[[Category: Yim V]]
[[Category: Yim, V.]]
[[Category: 4-endoglucanase]]
[[Category: Cellulase]]
[[Category: Glycosyl hydrolase family 5]]
[[Category: Mcsg]]
[[Category: Midwest center for structural genomic]]
[[Category: Mixed alpha-beta]]
[[Category: Protein structure initiative]]
[[Category: Psi-biology]]
[[Category: Putative beta-1]]
[[Category: Structural genomic]]
[[Category: Tim barrel]]
[[Category: Unknown function]]

Latest revision as of 17:25, 14 March 2024

Crystal structure of PbGH5A, a glycoside hydrolase family 5 enzyme from Prevotella bryantii B14Crystal structure of PbGH5A, a glycoside hydrolase family 5 enzyme from Prevotella bryantii B14

Structural highlights

3vdh is a 2 chain structure with sequence from Prevotella bryantii. This structure supersedes the now removed PDB entry 3l55. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.62Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

O06842_PREBR

3vdh, resolution 1.62Å

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OCA
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