3vdb: Difference between revisions

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[[Image:3vdb.jpg|left|200px]]


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==E. coli (lacZ) beta-galactosidase (N460T) in complex with galactonolactone==
The line below this paragraph, containing "STRUCTURE_3vdb", creates the "Structure Box" on the page.
<StructureSection load='3vdb' size='340' side='right'caption='[[3vdb]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3vdb]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VDB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VDB FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=149:D-GALACTONOLACTONE'>149</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
{{STRUCTURE_3vdb|  PDB=3vdb  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vdb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vdb OCA], [https://pdbe.org/3vdb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vdb RCSB], [https://www.ebi.ac.uk/pdbsum/3vdb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vdb ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/BGAL_ECOLI BGAL_ECOLI]


===E. coli (lacZ) beta-galactosidase (N460T) in complex with galactonolactone===
==See Also==
 
*[[Galactosidase 3D structures|Galactosidase 3D structures]]
 
__TOC__
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</StructureSection>
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(as it appears on PubMed at http://www.pubmed.gov), where 22446164 is the PubMed ID number.
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{{ABSTRACT_PUBMED_22446164}}
 
==About this Structure==
[[3vdb]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VDB OCA].
 
==Reference==
<ref group="xtra">PMID:022446164</ref><references group="xtra"/>
[[Category: Beta-galactosidase]]
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Dugdale, M L.]]
[[Category: Large Structures]]
[[Category: Dutkoski, M J.]]
[[Category: Dugdale ML]]
[[Category: Fraser, M E.]]
[[Category: Dutkoski MJ]]
[[Category: Hahn, J N.]]
[[Category: Fraser ME]]
[[Category: Huber, R E.]]
[[Category: Hahn JN]]
[[Category: Kappelhoff, J C.]]
[[Category: Huber RE]]
[[Category: Tamman, S D.]]
[[Category: Kappelhoff JC]]
[[Category: Wheatley, R W.]]
[[Category: Tamman SD]]
[[Category: 2-stage binding]]
[[Category: Wheatley RW]]
[[Category: Beta supersandwich]]
[[Category: Glycosidase]]
[[Category: Hydrolase]]
[[Category: Immunoglobulin]]
[[Category: Jelly-roll barrel]]
[[Category: Substrate binding]]
[[Category: Transition state stabilization]]

Latest revision as of 17:25, 14 March 2024

E. coli (lacZ) beta-galactosidase (N460T) in complex with galactonolactoneE. coli (lacZ) beta-galactosidase (N460T) in complex with galactonolactone

Structural highlights

3vdb is a 4 chain structure with sequence from Escherichia coli. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.05Å
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

BGAL_ECOLI

See Also

3vdb, resolution 2.05Å

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OCA
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