3unt: Difference between revisions

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[[Image:3unt.jpg|left|200px]]


{{STRUCTURE_3unt| PDB=3unt | SCENE= }}
==tRNA-guanine transglycosylase E339Q mutant==
<StructureSection load='3unt' size='340' side='right'caption='[[3unt]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[3unt]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Zymomonas_mobilis Zymomonas mobilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3UNT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3UNT FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.801&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3unt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3unt OCA], [https://pdbe.org/3unt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3unt RCSB], [https://www.ebi.ac.uk/pdbsum/3unt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3unt ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/TGT_ZYMMO TGT_ZYMMO] Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hypermodified nucleoside queuosine (Q) (7-(((4,5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine).[HAMAP-Rule:MF_00168]


===tRNA-guanine transglycosylase E339Q mutant===
==See Also==
 
*[[TRNA-guanine transglycosylase 3D structures|TRNA-guanine transglycosylase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
[[3unt]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Zymomonas_mobilis Zymomonas mobilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3UNT OCA].
[[Category: Large Structures]]
[[Category: Zymomonas mobilis]]
[[Category: Zymomonas mobilis]]
[[Category: TRNA-guanine transglycosylase]]
[[Category: Heine A]]
[[Category: Heine, A.]]
[[Category: Jakobi S]]
[[Category: Jakobi, S.]]
[[Category: Klebe G]]
[[Category: Klebe, G.]]
[[Category: Dimer interface]]
[[Category: Glycosyltransferase]]
[[Category: Guanine binding]]
[[Category: Metal-binding]]
[[Category: Queuosine biosynthesis]]
[[Category: Tgt]]
[[Category: Transferase]]
[[Category: Trna processing]]
[[Category: Zinc binding]]

Latest revision as of 17:03, 14 March 2024

tRNA-guanine transglycosylase E339Q mutanttRNA-guanine transglycosylase E339Q mutant

Structural highlights

3unt is a 1 chain structure with sequence from Zymomonas mobilis. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.801Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

TGT_ZYMMO Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hypermodified nucleoside queuosine (Q) (7-(((4,5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine).[HAMAP-Rule:MF_00168]

See Also

3unt, resolution 1.80Å

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