3tyj: Difference between revisions

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 ==Bacillus collagen-like protein of anthracis P159S mutant==
-<StructureSection load='3tyj' size='340' side='right' caption='[[3tyj]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
+<StructureSection load='3tyj' size='340' side='right'caption='[[3tyj]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[3tyj]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_anthracis Bacillus anthracis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TYJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3TYJ FirstGlance]. <br>
+<table><tr><td colspan='2'>[[3tyj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_anthracis Bacillus anthracis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TYJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3TYJ FirstGlance]. <br>
-</td></tr><tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2r6q|2r6q]], [[3twi|3twi]]</td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.15&#8491;</td></tr>
-<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BA_1222, bclA, GBAA_1222 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1392 Bacillus anthracis])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3tyj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tyj OCA], [https://pdbe.org/3tyj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3tyj RCSB], [https://www.ebi.ac.uk/pdbsum/3tyj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3tyj ProSAT]</span></td></tr>
-<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3tyj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tyj OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3tyj RCSB], [http://www.ebi.ac.uk/pdbsum/3tyj PDBsum]</span></td></tr>
+</table>
-<table>
+== Function ==
-<div style="background-color:#fffaf0;">
+[https://www.uniprot.org/uniprot/Q81JD7_BACAN Q81JD7_BACAN]
-== Publication Abstract from PubMed ==
-Variable lymphocyte receptors (VLRs) are the adaptive immune receptors of jawless fish, which evolved adaptive immunity independent of other vertebrates. In lieu of the immunoglobulin fold-based T and B cell receptors, lymphocyte-like cells of jawless fish express VLRs (VLRA, VLRB, or VLRC) composed of leucine-rich repeats and are similar to toll-like receptors (TLRs) in structure, but antibodies (VLRB) and T cell receptors (VLRA and VLRC) in function. Here, we present the structural and biochemical characterization of VLR4, a VLRB, in complex with BclA, the immunodominant glycoprotein of Bacillus anthracis spores. Using a combination of crystallography, mutagenesis, and binding studies, we delineate the mode of antigen recognition and binding between VLR4 and BclA, examine commonalities in VLRB recognition of antigens, and demonstrate the potential of VLR4 as a diagnostic tool for the identification of B. anthracis spores.
-Variable Lymphocyte Receptor Recognition of the Immunodominant Glycoprotein of Bacillus anthracis Spores.,Kirchdoerfer RN, Herrin BR, Han BW, Turnbough CL Jr, Cooper MD, Wilson IA Structure. 2012 Mar 7;20(3):479-86. PMID:22405006<ref>PMID:22405006</ref>
-From MEDLINEÂ®/PubMedÂ®, a database of the U.S. National Library of Medicine.<br>
-</div>
-== References ==
-<references/>
 __TOC__
 </StructureSection>
 [[Category: Bacillus anthracis]]
-[[Category: Cooper, M D.]]
+[[Category: Large Structures]]
-[[Category: Han, B W.]]
+[[Category: Cooper MD]]
-[[Category: Herrin, B R.]]
+[[Category: Han BW]]
-[[Category: Kirchdoerfer, R N.]]
+[[Category: Herrin BR]]
-[[Category: Turnbough, C L.]]
+[[Category: Kirchdoerfer RN]]
-[[Category: Wilson, I A.]]
+[[Category: Turnbough Jr CL]]
-[[Category: Exosporium]]
+[[Category: Wilson IA]]
-[[Category: Protein binding]]