3scx: Difference between revisions

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-[[Image:3scx.png|left|200px]]
-<!--
+==RB69 DNA Polymerase Triple Mutant(L561A/S565G/Y567A) Ternary Complex with dUpNpp and a Deoxy-terminated Primer in the Presence of Ca2+==
-The line below this paragraph, containing "STRUCTURE_3scx", creates the "Structure Box" on the page.
+<StructureSection load='3scx' size='340' side='right'caption='[[3scx]], [[Resolution|resolution]] 2.35&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[3scx]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_phage_RB69 Escherichia phage RB69]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SCX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3SCX FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.35&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DUP:2-DEOXYURIDINE+5-ALPHA,BETA-IMIDO-TRIPHOSPHATE'>DUP</scene></td></tr>
-{{STRUCTURE_3scx|  PDB=3scx  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3scx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3scx OCA], [https://pdbe.org/3scx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3scx RCSB], [https://www.ebi.ac.uk/pdbsum/3scx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3scx ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/DPOL_BPR69 DPOL_BPR69] This polymerase possesses two enzymatic activities: DNA synthesis (polymerase) and an exonucleolytic activity that degrades single stranded DNA in the 3'- to 5'-direction.
-===RB69 DNA Polymerase Triple Mutant(L561A/S565G/Y567A) Ternary Complex with dUpNpp and a Deoxy-terminated Primer in the Presence of Ca2+===
+==See Also==
+*[[DNA polymerase 3D structures|DNA polymerase 3D structures]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_21923197}}, adds the Publication Abstract to the page
+[[Category: Escherichia phage RB69]]
-(as it appears on PubMed at http://www.pubmed.gov), where 21923197 is the PubMed ID number.
+[[Category: Large Structures]]
--->
+[[Category: Konigsberg WH]]
-{{ABSTRACT_PUBMED_21923197}}
+[[Category: Wang J]]
+[[Category: Wang M]]
-==About this Structure==
-[[3scx]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_rb69 Enterobacteria phage rb69]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SCX OCA].
-==Reference==
-<ref group="xtra">PMID:021923197</ref><references group="xtra"/>
-[[Category: DNA-directed DNA polymerase]]
-[[Category: Enterobacteria phage rb69]]
-[[Category: Konigsberg, W H.]]
-[[Category: Wang, J.]]
-[[Category: Wang, M.]]
-[[Category: Dna binding]]
-[[Category: Transferase-dna complex]]