3s29: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:3s29.jpg|left|200px]]


<!--
==The crystal structure of sucrose synthase-1 from Arabidopsis thaliana and its functional implications.==
The line below this paragraph, containing "STRUCTURE_3s29", creates the "Structure Box" on the page.
<StructureSection load='3s29' size='340' side='right'caption='[[3s29]], [[Resolution|resolution]] 2.85&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3s29]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3S29 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3S29 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.85&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FRU:FRUCTOSE'>FRU</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MLA:MALONIC+ACID'>MLA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene></td></tr>
{{STRUCTURE_3s29|  PDB=3s29  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3s29 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3s29 OCA], [https://pdbe.org/3s29 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3s29 RCSB], [https://www.ebi.ac.uk/pdbsum/3s29 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3s29 ProSAT]</span></td></tr>
 
</table>
===The crystal structure of sucrose synthase-1 from Arabidopsis thaliana and its functional implications.===
== Function ==
 
[https://www.uniprot.org/uniprot/SUS1_ARATH SUS1_ARATH] Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex functions in docking export-competent ribonucleoprotein particles (mRNPs) to the nuclear entrance of the nuclear pore complex (nuclear basket). TREX-2 participates in mRNA export and accurate chromatin positioning in the nucleus by tethering genes to the nuclear periphery (By similarity).
 
__TOC__
==About this Structure==
</StructureSection>
[[3s29]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3S29 OCA].  
[[Category: Arabidopsis thaliana]]
[[Category: Arabidopsis thaliana]]
[[Category: Sucrose synthase]]
[[Category: Large Structures]]
[[Category: Garavito, R Michael]]
[[Category: Garavito RM]]
[[Category: Zheng, Yi]]
[[Category: Zheng YI]]
[[Category: Cytosol]]
[[Category: Fructose]]
[[Category: Glycosyltransferase]]
[[Category: Gt-b fold]]
[[Category: Rossmann fold]]
[[Category: Sucrose metabolism]]
[[Category: Sugar acceptor complex]]
[[Category: Transferase]]
[[Category: Udp]]

Latest revision as of 15:43, 14 March 2024

The crystal structure of sucrose synthase-1 from Arabidopsis thaliana and its functional implications.The crystal structure of sucrose synthase-1 from Arabidopsis thaliana and its functional implications.

Structural highlights

3s29 is a 8 chain structure with sequence from Arabidopsis thaliana. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.85Å
Ligands:, , , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

SUS1_ARATH Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex functions in docking export-competent ribonucleoprotein particles (mRNPs) to the nuclear entrance of the nuclear pore complex (nuclear basket). TREX-2 participates in mRNA export and accurate chromatin positioning in the nucleus by tethering genes to the nuclear periphery (By similarity).

3s29, resolution 2.85Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=3s29&oldid=4097117"