3qu1: Difference between revisions
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== | ==Peptide deformylase from Vibrio cholerae== | ||
[[http://www.uniprot.org/uniprot/DEF2_VIBCH DEF2_VIBCH | <StructureSection load='3qu1' size='340' side='right'caption='[[3qu1]], [[Resolution|resolution]] 1.80Å' scene=''> | ||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[3qu1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QU1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3QU1 FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> | |||
[[Category: | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3qu1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qu1 OCA], [https://pdbe.org/3qu1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3qu1 RCSB], [https://www.ebi.ac.uk/pdbsum/3qu1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3qu1 ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/DEF2_VIBCH DEF2_VIBCH] Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (By similarity). | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: Vibrio cholerae]] | [[Category: Vibrio cholerae]] | ||
[[Category: Anderson | [[Category: Anderson WF]] | ||
[[Category: Joachimiak A]] | |||
[[Category: Joachimiak | [[Category: Mulligan R]] | ||
[[Category: Mulligan | [[Category: Osipiuk J]] | ||
[[Category: Osipiuk | [[Category: Papazisi L]] | ||
[[Category: Papazisi | |||
Latest revision as of 14:58, 14 March 2024
Peptide deformylase from Vibrio choleraePeptide deformylase from Vibrio cholerae
Structural highlights
FunctionDEF2_VIBCH Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (By similarity). |
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