3qdl: Difference between revisions

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[[Image:3qdl.png|left|200px]]


{{STRUCTURE_3qdl|  PDB=3qdl  |  SCENE=  }}
==Crystal structure of RdxA from Helicobacter pyroli==
 
<StructureSection load='3qdl' size='340' side='right'caption='[[3qdl]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
===Crystal structure of RdxA from Helicobacter pyroli===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3qdl]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QDL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3QDL FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
[[3qdl]] is a 4 chain structure of [[Nitroreductase]] with sequence from [http://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QDL OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3qdl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qdl OCA], [https://pdbe.org/3qdl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3qdl RCSB], [https://www.ebi.ac.uk/pdbsum/3qdl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3qdl ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/RDXA_HELPY RDXA_HELPY] Reduction of a variety of nitroaromatic compounds using NADPH as source of reducing equivalents; two electrons are transferred (By similarity). Capable of reducing metronidazole; inactive RdxA renders the bacterium resistant to this compound. The reduction of metronidazole generates hydroxylamine, a potent mutagen and bactericide.<ref>PMID:9622362</ref>


==See Also==
==See Also==
*[[Nitroreductase|Nitroreductase]]
*[[Nitroreductase 3D structures|Nitroreductase 3D structures]]
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Helicobacter pylori]]
[[Category: Helicobacter pylori]]
[[Category: Hoffman, P S.]]
[[Category: Large Structures]]
[[Category: Martinez-Julvez, M.]]
[[Category: Hoffman PS]]
[[Category: Olekhnovich, I N.]]
[[Category: Martinez-Julvez M]]
[[Category: Rojas, A L.]]
[[Category: Olekhnovich IN]]
[[Category: Sancho, J.]]
[[Category: Rojas AL]]
[[Category: Oxidoreductase]]
[[Category: Sancho J]]

Latest revision as of 14:41, 14 March 2024

Crystal structure of RdxA from Helicobacter pyroliCrystal structure of RdxA from Helicobacter pyroli

Structural highlights

3qdl is a 4 chain structure with sequence from Helicobacter pylori. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

RDXA_HELPY Reduction of a variety of nitroaromatic compounds using NADPH as source of reducing equivalents; two electrons are transferred (By similarity). Capable of reducing metronidazole; inactive RdxA renders the bacterium resistant to this compound. The reduction of metronidazole generates hydroxylamine, a potent mutagen and bactericide.[1]

See Also

References

  1. Goodwin A, Kersulyte D, Sisson G, Veldhuyzen van Zanten SJ, Berg DE, Hoffman PS. Metronidazole resistance in Helicobacter pylori is due to null mutations in a gene (rdxA) that encodes an oxygen-insensitive NADPH nitroreductase. Mol Microbiol. 1998 Apr;28(2):383-93. PMID:9622362

3qdl, resolution 2.00Å

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