6ne0: Difference between revisions
New page: ==Structure of double-stranded target DNA engaged Csy complex from Pseudomonas aeruginosa (PA-14)== <StructureSection load='6ne0' size='340' side='right' caption='6ne0, [[Resolution|r... |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
==Structure of double-stranded target DNA engaged Csy complex from Pseudomonas aeruginosa (PA-14)== | ==Structure of double-stranded target DNA engaged Csy complex from Pseudomonas aeruginosa (PA-14)== | ||
< | <SX load='6ne0' size='340' side='right' viewer='molstar' caption='[[6ne0]], [[Resolution|resolution]] 3.40Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[6ne0]] is a 12 chain structure. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=6mpu 6mpu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6NE0 OCA]. For a <b>guided tour on the structure components</b> use [ | <table><tr><td colspan='2'>[[6ne0]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_UCBPP-PA14 Pseudomonas aeruginosa UCBPP-PA14]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=6mpu 6mpu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6NE0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6NE0 FirstGlance]. <br> | ||
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.4Å</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ne0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ne0 OCA], [https://pdbe.org/6ne0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ne0 RCSB], [https://www.ebi.ac.uk/pdbsum/6ne0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ne0 ProSAT]</span></td></tr> | |||
</table> | </table> | ||
== Function == | == Function == | ||
[ | [https://www.uniprot.org/uniprot/CSY1_PSEAB CSY1_PSEAB] CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Cas3 and Cascade participate in CRISPR interference, the third stage of CRISPR immunity (Potential). Involved in crRNA production or stability. The Csy ribonucleoprotein complex binds target ssDNA with high affinity but target dsDNA with much lower affinity.<ref>PMID:21398535</ref> <ref>PMID:22522703</ref> | ||
==See Also== | |||
*[[Endonuclease 3D structures|Endonuclease 3D structures]] | |||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</ | </SX> | ||
[[Category: Carter | [[Category: Large Structures]] | ||
[[Category: Chowdhury | [[Category: Pseudomonas aeruginosa UCBPP-PA14]] | ||
[[Category: Faith | [[Category: Carter J]] | ||
[[Category: Golden | [[Category: Chowdhury S]] | ||
[[Category: Lander | [[Category: Faith D]] | ||
[[Category: Lawrence | [[Category: Golden SM]] | ||
[[Category: Miettinen | [[Category: Lander GC]] | ||
[[Category: Rollins | [[Category: Lawrence MC]] | ||
[[Category: Santiago-Frangos | [[Category: Miettinen HM]] | ||
[[Category: Wiedenheft | [[Category: Rollins MF]] | ||
[[Category: Santiago-Frangos A]] | |||
[[Category: Wiedenheft B]] | |||