3ch4: Difference between revisions

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[[Image:3ch4.png|left|200px]]


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==The Crystal Structure of Human Phosphomavelonate Kinase At 1.8 A Resolution==
The line below this paragraph, containing "STRUCTURE_3ch4", creates the "Structure Box" on the page.
<StructureSection load='3ch4' size='340' side='right'caption='[[3ch4]], [[Resolution|resolution]] 1.76&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3ch4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CH4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CH4 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.76&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_3ch4|  PDB=3ch4  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ch4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ch4 OCA], [https://pdbe.org/3ch4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ch4 RCSB], [https://www.ebi.ac.uk/pdbsum/3ch4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ch4 ProSAT]</span></td></tr>
 
</table>
===The Crystal Structure of Human Phosphomavelonate Kinase At 1.8 A Resolution===
== Function ==
 
[https://www.uniprot.org/uniprot/PMVK_HUMAN PMVK_HUMAN]
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3CH4 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CH4 OCA].  
Check<jmol>
 
  <jmolCheckbox>
==Reference==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ch/3ch4_consurf.spt"</scriptWhenChecked>
Crystal structure of human phosphomavelonate kinase at 1.8 A resolution., Chang Q, Yan XX, Gu SY, Liu JF, Liang DC, Proteins. 2008 Jul 10;73(1):254-258. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18618710 18618710]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ch4 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Phosphomevalonate kinase]]
[[Category: Large Structures]]
[[Category: Single protein]]
[[Category: Chang Q]]
[[Category: Chang, Q.]]
[[Category: Gu S-Y]]
[[Category: Gu, S Y.]]
[[Category: Liang D-C]]
[[Category: Liang, D C.]]
[[Category: Yan X-X]]
[[Category: Yan, X X.]]
[[Category: Cholesterol biosynthesis]]
[[Category: Kinase]]
[[Category: Lipid synthesis]]
[[Category: Parallel beta-sheet with the strand order 23145]]
[[Category: Peroxisome]]
[[Category: Steroid biosynthesis]]
[[Category: Sterol biosynthesis]]
[[Category: Transferase]]
[[Category: Walker a motif]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 27 10:37:24 2008''

Latest revision as of 17:04, 13 March 2024

The Crystal Structure of Human Phosphomavelonate Kinase At 1.8 A ResolutionThe Crystal Structure of Human Phosphomavelonate Kinase At 1.8 A Resolution

Structural highlights

3ch4 is a 1 chain structure with sequence from Homo sapiens. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.76Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

PMVK_HUMAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3ch4, resolution 1.76Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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