3af5: Difference between revisions
Jump to navigation
Jump to search
New page: '''Unreleased structure''' The entry 3af5 is ON HOLD Authors: Nishida, Y. , Ishikawa, H. , Nakagawa, N. , Masui, R., Kuramitsu, S. Description: The crystal structure of an archaeal CPS... |
No edit summary |
||
| (13 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
The | ==The crystal structure of an archaeal CPSF subunit, PH1404 from Pyrococcus horikoshii== | ||
<StructureSection load='3af5' size='340' side='right'caption='[[3af5]], [[Resolution|resolution]] 2.60Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[3af5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AF5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AF5 FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3af5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3af5 OCA], [https://pdbe.org/3af5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3af5 RCSB], [https://www.ebi.ac.uk/pdbsum/3af5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3af5 ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/O50112_PYRHO O50112_PYRHO] | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/af/3af5_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3af5 ConSurf]. | |||
<div style="clear:both"></div> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: Pyrococcus horikoshii OT3]] | |||
[[Category: Ishikawa H]] | |||
[[Category: Kuramitsu S]] | |||
[[Category: Masui R]] | |||
[[Category: Nakagawa N]] | |||
[[Category: Nishida Y]] | |||
Latest revision as of 17:00, 13 March 2024
The crystal structure of an archaeal CPSF subunit, PH1404 from Pyrococcus horikoshiiThe crystal structure of an archaeal CPSF subunit, PH1404 from Pyrococcus horikoshii
Structural highlights
FunctionEvolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. |
| ||||||||||||||||||